Gene Information

Name : PCC7418_2096 (PCC7418_2096)
Accession : YP_007168472.1
Strain : Halothece sp. PCC 7418
Genome accession: NC_019779
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2313359 - 2314735 bp
Length : 1377 bp
Strand : -
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: npu:Npun_R3700 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyr

DNA sequence :
ATGCGAAGTGAATGGATCGCCCAACGTGCAGGGGATACTAACCTTAGTCAAATGCACTATGCCCGCCAAGGGAAAATTAC
CGAAGAGATGCACCATGTCGCCCAGCGAGAAAACCTCTCGCCAGAGCTAATTCGAGATGAAGTCGCACGGGGACGGATGA
TTATTCCCGCAAATATTAATCATCCCAACCTCGAACCGATGGCGATTGGGATTGCATCGAAGTGTAAAGTTAACGCCAAT
CTTGGCGCGTCTCCCAATTCCTCCAACATTGAGGAAGAAGTGGATAAGTTGAGACTTGCTGTCAAGTATGGCGCAGATAC
TGTCATGGATTTATCCACAGGTGGCGGAAACTTGGATGAAATCCGCAGTGCAATTATCCAAGCCTCGTCTGTTCCCATTG
GCACAGTGCCAGTTTATCAGACTTTAGAAAGTGTTCATGGCAATATTGAAAACCTGACTGCTGATGACTTTCTGCACGTC
ATTGAAAAACACGCCCAGCAAGGGGTTGATTACCAAACGATTCACGCGGGATTACTGATTGAGTATCTCCCTCTGGTTAA
AAATCGGATTACTGGTATTGTTTCCCGTGGTGGCGGAATTATTGCCAAGTGGATGTTGCATCATCACAAGCAAAATCCCC
TCTATACTCATTTTGATGACATCATTGAAATCTTCAAAAAATATGATGTCTCTTTCAGTTTAGGGGATTCTCTTCGTCCA
GGTTGTACTCATGATGCGACTGACGAAGCGCAATTATCGGAGTTGAAAACTTTAGGTGAACTGACTCGTCGCGCATGGGA
ACATGATGTGCAAGTGATGGTAGAAGGTCCTGGTCATGTGCCGATGGATCAAATTGAGTACAATGTGAAAAAACAGATGG
AAGAGTGTAGTGAAGCGCCCTTCTATGTTTTGGGACCCTTAGTTACTGATATTGCTCCTGGTTACGACCATATTACCTCC
GCAATTGGGGCCGCGATGGCGGGCTGGTATGGAACTGCTATGCTGTGCTATGTTACGCCAAAAGAGCATTTAGGCTTACC
CAATGCTGAGGATGTCCGTGAAGGGCTGATTGCCTATAAAATTGCTGCTCATGCTGCGGATATGGCACGTCATCGTCAAG
GAGCGCGCGATCGCGATGACCAACTCTCAGAGGCGCGGTATAACTTCGACTGGAATCGTCAATTTGAACTTTCTCTCGAC
CCTGATCGCGCTAAAGAATATCATGACGAAACCTTACCAGCTGATATCTACAAAACTGCGGAATTCTGTTCCATGTGTGG
ACCGAAATTCTGTCCCATGCAGACCAAAGTGGATGCAGATGCGCTGACTGAGTTAGAGAAATTCTTGGCGAAAGAAGAAG
CGGTGAGTAAAGCCTAA

Protein sequence :
MRSEWIAQRAGDTNLSQMHYARQGKITEEMHHVAQRENLSPELIRDEVARGRMIIPANINHPNLEPMAIGIASKCKVNAN
LGASPNSSNIEEEVDKLRLAVKYGADTVMDLSTGGGNLDEIRSAIIQASSVPIGTVPVYQTLESVHGNIENLTADDFLHV
IEKHAQQGVDYQTIHAGLLIEYLPLVKNRITGIVSRGGGIIAKWMLHHHKQNPLYTHFDDIIEIFKKYDVSFSLGDSLRP
GCTHDATDEAQLSELKTLGELTRRAWEHDVQVMVEGPGHVPMDQIEYNVKKQMEECSEAPFYVLGPLVTDIAPGYDHITS
AIGAAMAGWYGTAMLCYVTPKEHLGLPNAEDVREGLIAYKIAAHAADMARHRQGARDRDDQLSEARYNFDWNRQFELSLD
PDRAKEYHDETLPADIYKTAEFCSMCGPKFCPMQTKVDADALTELEKFLAKEEAVSKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 3e-132 63
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 3e-132 63
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 2e-128 57