Gene Information

Name : PCC7418_2010 (PCC7418_2010)
Accession : YP_007168390.1
Strain : Halothece sp. PCC 7418
Genome accession: NC_019779
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2207976 - 2209013 bp
Length : 1038 bp
Strand : -
Note : PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: amr:AM1_A0162 iron(III) dicitrate ABC transporter, permease protein; PFAM: transport system permease protein; SPTR: Iron(I

DNA sequence : 
ATGAAATCTCCTTGGTTGGTCATCCGTCTGCAAAAAATTCCTCTGTCTTTTCGCATTCATCGGCGTGTGCCAATCATTTT
GCTCATCTTGGCAGTTGCCACCTTACTGGTCATGATCATCAGTGTGAGTTATGGGGAATATCCAGTTCCTCCCCTCGCAA
CAGTAAAAACGATTCTAGGGCAAAGTGAGAACAGCGATTATGGATTTATTATCCGCACCTTGCGCTTACCCCGTACCCTC
GTTGCGTTTGGTGTCGGAGTCGGACTCGCGATCGCGGGAACTATTACCCAAGGGATTACTCGTAACCCTCTGGCTGCACC
CGATATCATTGGCGTTAATGCAGGGGCTTCTCTCGCTGCTGTCACATTATTAGTCTTATTGCCAACAGTTTCCATTGCCC
TTTTACCCGTTGTTGCCTTTCTCGGCGGGTTAATGGTTGCTGTCCTGATTTATCTTCTGGCTTGGCAAGGGGGTAGTTCT
CCGATCCGATTAATTCTTGTGGGCATCGGACTCAATCTGATTGCCTCTGCACTCACCAATCTCATGATTACGTTTGGTAA
TATCAACACCGTTTCTCAAGCCTTGGTTTGGTTAACAGGCAGCGTTTATGGACGCAGTTGGGAACAACTCTTGACCTTTT
TACCTTGGTTGGTCATCTTTGGTTTGCTTGCTTTAGGGATGGCGAGAAATTTGAATGTGCTTAGTCTTGGGGATGAAACC
GCGCGAGGATTAGGTAATGCTATTGAATGGCAGCGGGGAATCTTACTCCTCACCAGTGTTGCCCTTGCCAGTGCATCAGT
TGCTACAGCGGGGTCAATTGGTTTTGTGGGCTTAATGGCACCGCACTTGTCTCGTCAGTTAGTCGGAGGAACTTATGCTG
GACAACTGCCCACAGCAGGAATGATCGGTGGACTGCTCGTTGTCATTGCTGATTTATTGGGACGGATGCTTTTAGCGCCA
ACCGAACTGCCTTGTGGTCTGATTACTGCTGCTGTGGGAGCACCTTTTTTTATTTATCTACTCATTCGCAAACGGTAA

Protein sequence : 
MKSPWLVIRLQKIPLSFRIHRRVPIILLILAVATLLVMIISVSYGEYPVPPLATVKTILGQSENSDYGFIIRTLRLPRTL
VAFGVGVGLAIAGTITQGITRNPLAAPDIIGVNAGASLAAVTLLVLLPTVSIALLPVVAFLGGLMVAVLIYLLAWQGGSS
PIRLILVGIGLNLIASALTNLMITFGNINTVSQALVWLTGSVYGRSWEQLLTFLPWLVIFGLLALGMARNLNVLSLGDET
ARGLGNAIEWQRGILLLTSVALASASVATAGSIGFVGLMAPHLSRQLVGGTYAGQLPTAGMIGGLLVVIADLLGRMLLAP
TELPCGLITAAVGAPFFIYLLIRKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 1e-31 43
DIP0584 NP_938960.1 iron transport system membrane protein Virulence Not named Protein 3e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7418_2010 YP_007168390.1 transport system permease BAC0163 Protein 4e-32 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7418_2010 YP_007168390.1 transport system permease VFG1043 Protein 6e-32 43