Gene Information

Name : PCC7418_2009 (PCC7418_2009)
Accession : YP_007168389.1
Strain : Halothece sp. PCC 7418
Genome accession: NC_019779
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2207160 - 2207960 bp
Length : 801 bp
Strand : -
Note : PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593:IPR003439:IPR017871; KEGG: ana:all2584 ATP-binding protein of ferrichrome ABC transporter; PFAM: ABC transporter related; SMA

DNA sequence :
ATGAACCGACTGGAAACGCAAAACTTGACCTTAAGCTACCACCAAACCCCGATTATTCATGATCTCAACTTCGGGGTTCC
CGCAGAAAAAATAACGATTTTAGTCGGTCCCAATGGCTGTGGAAAATCAACGCTCTTGCGAGGACTGGCGCGATTACTGA
AACCGAAAGGGGGGGTGGTTTATCTCGATGGTGCAGATATTTTTCAACGTTCCACGAAAGCAGTAGCCAAGCGGTTAGGA
ATTTTACCTCAAAGCGCGATCGCGCCAGAAGGGTTAACCGTGAGAGATTTAGTTGCCCAAGGACGATATCCTCACCAAAA
CTGGCTACAGCAGTGGTCCAAAGAAGATGAGACAATGGTCACTTGGGCTTTAGAATTATCTGGAATGACGGAACTTGCGG
AACGTCCCTTAGATCATCTTTCTGGAGGGCAACGACAACGGGCTTGGGTTGCCATGGCTTTGGCGCAAAATACAGAAATT
CTGCTGTTAGATGAACCGACAACTTTTCTGGATTTAGCCCACCAATTGGAGATTTTAGATTTATTAGCAGAACTGAATAT
CACTCAGAGTCGGACGATTGTGATGGTCCTTCATGATCTCAATCAAGCTGCCCGTTATGCCGATCATTTGGTGGTTGTTC
AAGAGGGTCAGATTTACACTCAGGGAACACCCGAACAAGTAATCACTGAAGGAATGGTCAAAACGGTATTTGGTGTGGCT
TCACGAATTGTACCTGATCCCGTGGTGGGAACGCCTTTATGTATTCCTTTGTCTAATCCAAAAACGCTGTGTGATCGATA
A

Protein sequence :
MNRLETQNLTLSYHQTPIIHDLNFGVPAEKITILVGPNGCGKSTLLRGLARLLKPKGGVVYLDGADIFQRSTKAVAKRLG
ILPQSAIAPEGLTVRDLVAQGRYPHQNWLQQWSKEDETMVTWALELSGMTELAERPLDHLSGGQRQRAWVAMALAQNTEI
LLLDEPTTFLDLAHQLEILDLLAELNITQSRTIVMVLHDLNQAARYADHLVVVQEGQIYTQGTPEQVITEGMVKTVFGVA
SRIVPDPVVGTPLCIPLSNPKTLCDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-67 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-61 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-60 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-60 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-60 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-60 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-52 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-58 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-58 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-49 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-49 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-49 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-49 44
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 4e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7418_2009 YP_007168389.1 ABC transporter BAC0164 Protein 4e-61 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7418_2009 YP_007168389.1 ABC transporter VFG1042 Protein 4e-61 50
PCC7418_2009 YP_007168389.1 ABC transporter VFG0925 Protein 1e-64 50