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Name : PCC7418_1580 (PCC7418_1580) Accession : YP_007167980.1 Strain : Halothece sp. PCC 7418 Genome accession: NC_019779 Putative virulence/resistance : Unknown Product : ssrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 1727804 - 1728277 bp Length : 474 bp Strand : + Note : PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; COGs: COG0691 tmRNA-binding protein; InterPro IPR020081:IPR000037; KEGG: npu:Npun_F0451 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGAGCAAAGAAAATCAACCTAATGGCATTAAAATTATCGCTCAAAATCGCAAAGCACGGTTTCTGTATGAGATTTTAGA AACCTATGAAGCGGGTATTCAACTCATTGGTACAGAAGTGAAATCTATTCGTGCGGGGCGTGTCAATTTACAAGATGGCT ACGCTTTAATTCGTAAAGGAGAAGTATGGCTGATTAATGTTAATATTTCTCCTTATGAAGGAAGCGGTGCTTATTTCAAT CATGAGCCGAAACGAACCAGAAAACTGTTACTACATCGCCAAGAAATTAGTAAATTAATTGGGAAAACCGAACAGAAAGG ATTAACTTTAGTTCCTTTAAAGATGTACTTAAAAAAAGGAATTGTCAAGTTACAAATTGGCTTAGGAAAAGGGAAGAAAT TACATGATAAGCGCGAAACGATTAAACGTCGTGAAGATCAAAAAGAAATGCAGCGTGTGGTTAAGCGGTACTAA Protein sequence : MSKENQPNGIKIIAQNRKARFLYEILETYEAGIQLIGTEVKSIRAGRVNLQDGYALIRKGEVWLINVNISPYEGSGAYFN HEPKRTRKLLLHRQEISKLIGKTEQKGLTLVPLKMYLKKGIVKLQIGLGKGKKLHDKRETIKRREDQKEMQRVVKRY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-22 | 50 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 1e-27 | 48 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 4e-19 | 43 |
