Gene Information

Name : PCC7418_1518 (PCC7418_1518)
Accession : YP_007167921.1
Strain : Halothece sp. PCC 7418
Genome accession: NC_019779
Putative virulence/resistance : Virulence
Product : urease
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.5
Position : 1661381 - 1663099 bp
Length : 1719 bp
Strand : +
Note : PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit; COGs: COG0804 Urea amidohydrolase (urease) alpha subunit; InterProIPR017951:IPR017950:IPR005848:IPR011612:IPR 006680:IPR017952; KEGG: npu:Npun_F0825 urea

DNA sequence :
ATGAGTTACCGAATGGATCGCCGTGCTTACGCTGAAACTTTTGGTCCGACAGTGGGCGATCGCGTGCGTTTGGCGGATAC
GGAATTATTCATTGAAGTGGAACAAGATCTTACCACCTATGGCGAAGAAGTGAAGTTTGGGGGCGGAAAAGTCATCCGCG
ATGGCATGGGACAATCGCCAATTTCTCGTGCTGATGGTGCAGTAGATGTAGTGATTACTAACGCCCTCATTCTCGATTGG
TGGGGGATTGTGAAAGCAGATGTGGGGATTAAAGATGGTCGCATTTTCAAAATTGGGAAAGCAGGAAATCCCTACATTCA
AGATAATGTCGATATTATTATCGGTCCCAGTACCGAAGCAGTGGCGGGAGAAGGACTGATCCTCACGGCTGGCGGAATTG
ACAGTCATATTCACTTTATTTGTCCGCAACTGATTGAAACCGCGATCGCGTCTGGAATAACGACGATGTTTGGCGGTGGA
ACTGGACCCGCAACGGGAACGAATGCAACCACTTGCACCCCTGGATCATGGAATCTGGGCTGGATGTTACAAGCAGCAGA
AGCCTTCCCCGTGAATTTAGGCTTTTTCGGGAAAGGAAATAGCGCCCAACCGCAAGGGATTGAAGAACAGATCATTGCAG
GCGCAATGGGCTTAAAACTCCATGAAGACTGGGGAACCACACCATCCTCGATTGATACCTGTCTCTCGGTGGCGGATCGC
TACGATGTGCAAGTTGCCATCCATACCGACACCCTCAACGAAGCGGGGTTTGTGGAAGATACCATTAACGCCTTCAAAAA
TCGCGCTATCCACACCTATCACACCGAAGGCGCGGGTGGCGGTCATGCGCCAGATATTATCAAAGTTTGCGGTCAAAGTA
ATGTTTTACCCTCTTCTACCAATCCCACCCGCCCTTACACCACCAACACCCTAGAAGAACATTTGGATATGTTGATGGTG
TGTCATCACCTCGATCCCAATATTCCCGAAGATGTGGCGTTTGCTGAATCACGGATTCGCAGAGAAACCATTGCAGCCGA
AGATATCTTACATGATTTAGGCGCATTCAGCGCGATCGCGTCCGATTCCCAAGCCATGGGGCGTGTCGGGGAAACCATTA
TTCGCACTTGGCAAACCGCCCACAAAATGAAACTACAACGGGGTTTACTTCCCTCACCAGACAATAGCAGCGAAACCCAT
GACAACTTCCGCGCCAAGCGATACGTTGCCAAATATACGATTAACTCCGCCATTATGCACGGAATCGCCCATGAAGTGGG
TTCGATTGAAGAAGGGAAACTCGCCGACTTGTGTCTCTGGAAGCCCAGTTGTTTTGGAGTCAAACCTGAGATCATTATGA
AAGGGGGCGCGATCGCGTATGCCCAAATGGGAGACGCAAACGCCAGTATCCCCACCCCACAGCCCATCGAGATGCGACCC
ATGTTCGCCAGTTATGGGAAAGCACTTGCGACAACCTCTCTCACCTTTGTTTCTCAAGCGGGAATGGAAGCCAACATTGG
ACAACAACTGGGTTTAGAAAAAACTTTAGTCCCTGTCCGAAATACCCGTACTATTGGCAAAGCGGAGATGAAATGTAATA
ATGCACTCCCTCACATTGAAGTAGATTCCGAAACCTATGAAGTGCGAGCAGATGGAGAACTTTTAACCTGTGAACCCGCT
ACCACTTTACCGATGGCGCAAAGGTATTTCTTGTTTTAG

Protein sequence :
MSYRMDRRAYAETFGPTVGDRVRLADTELFIEVEQDLTTYGEEVKFGGGKVIRDGMGQSPISRADGAVDVVITNALILDW
WGIVKADVGIKDGRIFKIGKAGNPYIQDNVDIIIGPSTEAVAGEGLILTAGGIDSHIHFICPQLIETAIASGITTMFGGG
TGPATGTNATTCTPGSWNLGWMLQAAEAFPVNLGFFGKGNSAQPQGIEEQIIAGAMGLKLHEDWGTTPSSIDTCLSVADR
YDVQVAIHTDTLNEAGFVEDTINAFKNRAIHTYHTEGAGGGHAPDIIKVCGQSNVLPSSTNPTRPYTTNTLEEHLDMLMV
CHHLDPNIPEDVAFAESRIRRETIAAEDILHDLGAFSAIASDSQAMGRVGETIIRTWQTAHKMKLQRGLLPSPDNSSETH
DNFRAKRYVAKYTINSAIMHGIAHEVGSIEEGKLADLCLWKPSCFGVKPEIIMKGGAIAYAQMGDANASIPTPQPIEMRP
MFASYGKALATTSLTFVSQAGMEANIGQQLGLEKTLVPVRNTRTIGKAEMKCNNALPHIEVDSETYEVRADGELLTCEPA
TTLPMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 7e-172 67
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 7e-172 67
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 5e-164 62
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-165 62
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-165 62
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-165 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC7418_1518 YP_007167921.1 urease VFG0270 Protein 5e-151 62