Gene Information

Name : Cyast_0050 (Cyast_0050)
Accession : YP_007163683.1
Strain : Cyanobacterium stanieri PCC 7202
Genome accession: NC_019778
Putative virulence/resistance : Unknown
Product : transposase, IS605 OrfB family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 57412 - 58608 bp
Length : 1197 bp
Strand : +
Note : PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: ava:Ava_B0285

DNA sequence :
ATGCTAAAAGTAGTCAAAGCAAGATTATATCCTACAAATCCACAGAAAGAATCGTTAGCTAAGGCTTTTGGTTCTTGCCG
TTGGGTGTGGAATCGTTTTCTAGCTTTGACGAATGAAACATACAAGCAAACAGGTAAAGGGTTATCTCGTTATGACCTTC
AAAAACAATTACCTTCTCTCAAGAAAGAATATGAATGGCTAACAGAAACGTACTCACAATGTTTGCAGGTTGTATGCCTG
AATCTTAGTCGTTCTTTTATCAACTTTTTTGAGAAACGGGCTTCTTTTCCTAGATTCAAGTCTAAGCATGGTAAGCAATC
TCTTAGCTATCCTCAAAATGTCAAAATCAAAGGAGATATGATTATTTTTCCGAAGTTAGGAGAAATTTATGCTAAGATTC
ATCGTTCTATAGATGGTGAAATCAAGACTGTAACTATCTCTAAAAATAAAGCGGAGCAGTATTATGCTTCTATTTTATTT
GAAGATGGAAAAGAACAACCATTACCAAACACTGAAGGTAAAGCAATCGGATTGGATATGGGGATAAAAGATTTTTGTGT
CGCCAGTGATGGTTCTAAGTTTGATAACCCTAGATGGTTAGAAAAACATGAACGCAACTTAAAAAATAAACAACAGGCTT
TATCTCGTAAGCAAAAAGGGTCAAATAATCGTAATAAAGCTCGAATAAAAGTAGCTAAGGTTCATAATAAAATATCTCGC
ACTCGTGAGGATTTTCACCATAAACTATCACGCAGGATAGTAAACGAAAACCAAGTTGTAATATGTGAGAATCTCAACAT
CAAGGGCATGGTAAAGAATCATTGTCTAGCTAAGTCAATACAACAGGTAGGTTGGGGACAATTTCAGACAATGCTCAAGT
ATAAATGTGAACAAGAAGGTAAGATTTATCTTGAAATAGATAGATTTTTTCCTAGTTCCAAAACTTGTAATCATTGTTTG
AATGTGGTTGATAGCTTACTCTTAGATATTAGACAATGGGAATGTCCAAGATGTAAAACTAAACACGATAGAGATATAAA
CGCATCATGCAATATCAGGGATGAAGGACTGCGAATATTGTCGTTAGGAACTAGCGAGTCAGCATCTTGCCCAGATGTAA
GACCTAGTAAGGGTGGACGTAAGAAAGCCACTACTAGGCTATCTGTTGGAGATGAAGCCCACACCATAAATCTTTGA

Protein sequence :
MLKVVKARLYPTNPQKESLAKAFGSCRWVWNRFLALTNETYKQTGKGLSRYDLQKQLPSLKKEYEWLTETYSQCLQVVCL
NLSRSFINFFEKRASFPRFKSKHGKQSLSYPQNVKIKGDMIIFPKLGEIYAKIHRSIDGEIKTVTISKNKAEQYYASILF
EDGKEQPLPNTEGKAIGLDMGIKDFCVASDGSKFDNPRWLEKHERNLKNKQQALSRKQKGSNNRNKARIKVAKVHNKISR
TREDFHHKLSRRIVNENQVVICENLNIKGMVKNHCLAKSIQQVGWGQFQTMLKYKCEQEGKIYLEIDRFFPSSKTCNHCL
NVVDSLLLDIRQWECPRCKTKHDRDINASCNIRDEGLRILSLGTSESASCPDVRPSKGGRKKATTRLSVGDEAHTINL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB AAF80205.1 TnpB Not tested cag PAI Protein 2e-56 42
tnpB AAC44710.2 TnpB Not tested cag PAI Protein 2e-56 42