Gene Information

Name : Cyast_2883 (Cyast_2883)
Accession : YP_007166470.1
Strain : Cyanobacterium stanieri PCC 7202
Genome accession: NC_019778
Putative virulence/resistance : Virulence
Product : L-glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 3158503 - 3159924 bp
Length : 1422 bp
Strand : +
Note : PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR004809; KEGG: cyt:cce_4432 glutamine synthetase, glutamate--a

DNA sequence :
ATGGCTAAAACCCCCCAAGAAGTCTTACAAATGATCAAGGATAATGGGATCAAGATGATCGATCTCAAATTTATTGATCT
ACCCGGCACATGGCAACACTGCACATTTTACTATGACCAAATAGACGAAGATTCGTTCACCGAAGGTGTACCCTTTGATG
GTTCCAGTATCCGTGGTTGGAAAGCCATTAATGACTCCGATATGGCGATGGTACCAGATCCTAACACTGCATGGATCGAT
CCTTTCTACAAAGAGCCTACCCTGAGCATGATTTGCCGTATCAAAGAACCTCGCACAGGGGAATGGTACTCCAGAGATCC
TCGTAGTATTGCTTACAAAGCCTTAGATTACTTAGCTTCCACTGGTTTAGGTGATACCGCTTATTTTGGTCCCGAAGCAG
AATTTTTCCTCTTTGACGACGTTAGATTTGACCAAACCGAAAATAAAGGTTACTACTATGTAGATAGTGTCGAAGGGCGC
TGGAACTCTGGTAGGGAAGAAGAAGGAGGCAACTTAGGTTATAAACCGGGATACAAGCAGGGATATTTCCCCGTAGCCCC
CACCGATACCATGCAAGACATTCGTACCGAAATGTTATTAACCATGGCTGATTGTGGTGTACCCATCGAAAAACACCATC
ACGAAGTGGCCACTGGGGGACAAAATGAATTAGGTTTCAAATTTGGTACTTTGGTAGAAGCGGCTGACCATTTGATGACC
TATAAATATGTCATTAAAAACGTAGCTAAAAAATACGGTAAGAGTGCTACTTTCATGCCCAAACCCTTGTTTAATGATAA
TGGTTCTGGGATGCACACCCACCAATCTATCTGGAATGAAGGTAAACCTTTATTTGCAGGGGATCAATATGCAGGATTGA
GCGAAATGGCTCTCTACTACATCGGTGGTATCCTCAAACACGCTCCCGCTTTACTTGCTTTTACTAACCCCACCACCAAC
TCTTACAAACGTCTTGTACCCGGTTTTGAAGCCCCTGTAAACTTGGCTTATTCCCAAGGAAACCGCTCTGCTTCTGTACG
TATTCCTTTATCTGGCGACAATCCCAAAGCCAAGCGTTTAGAATTCCGTTGTCCTGATGCTACCAGTAACCCTTACCTTG
CTTTTGCGGCGATGCTTTGTGCTGGGATTGATGGTATCAAGAATAAAATTCACCCTGGAGAGCCTTTGGATGTGGATATT
TATGATTTATCCCCCGAAGAGTTGAGCAAAATTCCTTCCACCCCTGCATCTTTAGAGGGTGCTTTGGAAGCGTTGGAAAA
AGATCATGCTTTCTTGATTGATAGCGGTGTATTCACCATGGAATTTATCGAAAACTGGATCGAGTACAAATTAGATAATG
AGGTTAACCCCTTACGTCTTCGTCCTCACCCCTATGAGTTCGCTTTATACTACGATGTGTAA

Protein sequence :
MAKTPQEVLQMIKDNGIKMIDLKFIDLPGTWQHCTFYYDQIDEDSFTEGVPFDGSSIRGWKAINDSDMAMVPDPNTAWID
PFYKEPTLSMICRIKEPRTGEWYSRDPRSIAYKALDYLASTGLGDTAYFGPEAEFFLFDDVRFDQTENKGYYYVDSVEGR
WNSGREEEGGNLGYKPGYKQGYFPVAPTDTMQDIRTEMLLTMADCGVPIEKHHHEVATGGQNELGFKFGTLVEAADHLMT
YKYVIKNVAKKYGKSATFMPKPLFNDNGSGMHTHQSIWNEGKPLFAGDQYAGLSEMALYYIGGILKHAPALLAFTNPTTN
SYKRLVPGFEAPVNLAYSQGNRSASVRIPLSGDNPKAKRLEFRCPDATSNPYLAFAAMLCAGIDGIKNKIHPGEPLDVDI
YDLSPEELSKIPSTPASLEGALEALEKDHAFLIDSGVFTMEFIENWIEYKLDNEVNPLRLRPHPYEFALYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-103 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyast_2883 YP_007166470.1 L-glutamine synthetase VFG1399 Protein 1e-128 57