Gene Information

Name : Cyast_2861 (Cyast_2861)
Accession : YP_007166450.1
Strain : Cyanobacterium stanieri PCC 7202
Genome accession: NC_019778
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3129081 - 3129833 bp
Length : 753 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: cyh:Cyan8802_2

DNA sequence : 
ATGTTGTCTCTGGACTTGCCATCGATTTCTACCAAAACAAAGGGACAGTTACCCACAAGTATTCTCGTTATTGAAGATGA
AGACTTAATCAGAAATATGATTAGTCTAAATCTCGAAGAAGAAGGATACCAAGTAACCAAAGCCCAAAGCGGTAGAGAAG
CCTTGAATTTACTTGAGCGTCAAATATCCAATGATCAAACCCATGGATTTGACATGATTATTTTGGATTTAATGTTACCT
GAAGTAAATGGCTTAGATATATGCCGCTTACTTAGACATCGAGGTAATAATATCCCCATTCTCATTTTGAGTGCCAAAGC
AGCGGAAACAGACCGAGTTTTAGGATTAGAAGTCGGTGCCGATGACTATCTAACCAAACCCTTTAGCATGAAGGAACTAA
TCGCCCGTTGTCGCGCCTTAATTCGTCGTAATAACATTAATAACTCATCATCGGATAATATCAAACAATATAAAGATATT
ACCCTTTTCCCCGATGAATGTAGAGTGACGGTGAGAAATCAATCAGTAAATCTATCTCCAAAAGAATTTAAACTTCTTGA
ATTATTTATGACCTATCCTAAGAGAGTCTGGGATAGGGATCAACTCATCGACAATATTTGGGGTGCTGATTTCCTCGGAG
ATACGAAAACAGTGGATGTGCATATTCGTTGGTTGAGGGAAAAATTAGAGCAAGACCCTAGTAGTCCAGAATATATTATT
ACGGTGAGGGGTTTTGGCTATCGTTTTGGGTAA

Protein sequence : 
MLSLDLPSISTKTKGQLPTSILVIEDEDLIRNMISLNLEEEGYQVTKAQSGREALNLLERQISNDQTHGFDMIILDLMLP
EVNGLDICRLLRHRGNNIPILILSAKAAETDRVLGLEVGADDYLTKPFSMKELIARCRALIRRNNINNSSSDNIKQYKDI
TLFPDECRVTVRNQSVNLSPKEFKLLELFMTYPKRVWDRDQLIDNIWGADFLGDTKTVDVHIRWLREKLEQDPSSPEYII
TVRGFGYRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-36 45
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-36 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 2e-45 44
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 3e-40 44
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 1e-37 42
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 2e-37 42
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 2e-37 42
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 2e-37 42
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 2e-37 42
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 2e-37 42
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 2e-37 42
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 2e-37 42
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 1e-37 42
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 2e-37 42
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 2e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator VFG1702 Protein 2e-36 45
Cyast_2861 YP_007166450.1 winged helix family two component transcriptional regulator VFG1563 Protein 2e-36 44