Gene Information

Name : Cyast_2459 (Cyast_2459)
Accession : YP_007166052.1
Strain : Cyanobacterium stanieri PCC 7202
Genome accession: NC_019778
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2698398 - 2700872 bp
Length : 2475 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit

DNA sequence :
ATGTTTGAACGCTTCACAGAAAAGGCGATCAAGGTGATCATGTTGGCTCAAGAAGAAGCTCGTCGCTTGGGTCATAACTT
CGTAGGTACCGAGCAAATATTGCTTGGGCTAATCGGAGAAGGCACCGGTGTCGCCGCCAAAGTCCTCAAACCCATGGGTG
TTAACTTAAAAGATGCCCGTATCGAGGTAGAAAAAATTATCGGGCGCGGTTCAGGATTTGTCGCCGTAGAAATTCCTTTT
ACTCCCAGAGCCAAAAGAGTTTTGGAATTATCTTTAGAAGAAGCTCGTCAATTAGGGCATAACTACATTGGCACAGAGCA
TTTACTTTTAGGGTTAATTAGAGAAGGGGAAGGAGTCGCCGCTAGGGTTTTAGAAAATCTTGGGGTTGATCTAGGCAAAG
TAAGAACCCAAGTGATCAGAATGTTAGGAGAAACCGAGTCGGCGCCCGTGGGTGCTGGTGGGGGCAGTCGTTCCAATAAA
ACTCCTACTCTGGATGAATTTGGCTCTAATTTAACCAACCTTGCCACAGAAGGAAAGTTAGACCCCGTGGTAGGTAGACA
AAAGGAAATTGAGAGAGTTATTCAAATTCTTGGTCGTCGTACCAAAAATAACCCTGTCCTCATTGGTGAGCCGGGGGTAG
GTAAAACGGCCATCGCCGAAGGACTCGCCCAAAGAATTGGTAATAAAGATGTACCAGATCTATTGGAAGATAAAAGAGTT
GTCACCCTCGATATTGGTTTACTGGTAGCAGGAACCAAATACCGTGGGGAATTTGAAGAACGACTCAAAAAAATCATGGA
GGAAATTCGTCAGGCTGGTAATGTAATTCTGGTCATTGATGAAGTTCATACCCTCATTGGTGCTGGTGCCGCCGAAGGGG
CGATCGATGCGGCTAATATTTTAAAACCTGCCCTCGCCCGTGGTGAACTACAGTGTATTGGTGCTACCACCCTCGATGAA
TACCGTAAACACATCGAAAGGGATGCCGCCCTTGCCCGTCGTTTCCAACCCGTTATGGTGGGTGAGCCTAGCGTAGATGA
AACCATCGAAATTCTCTTCGGTTTACGGGAACGCTATGAGCAACACCACAAACTAAAAATTTCCGATGAAGCCCTTGATG
CGGCGGCGAAATTATCTGATCGTTATATCAGCGATCGCTACTTACCCGATAAAGCCATCGACCTCATAGACGAAGCAGGA
TCCAGAGTGCGTTTACTCAACTCCCAACTACCTGCCGAAGCCAAGGAGTTAGATAAAGAATTACGTCAAGTATTAAAAGA
AAAAGACGAAGCTGTCAGATCCCAAGACTTTGATAAAGCAGGGGAACTGAGGGATCGGGAAATGGAAATCAAAACCGAAA
TCCGTGGTTTAGCAGATCAGAAAAAACAAAATCCTGATGTGAGTGACAATCCCGTTGTTAACGAGGAAGAAATCGCTCAA
ATCGTAGCCTCTTGGACTGGGGTACCTGTACAAAAACTCACCGAATCTGAGTCCGAAAAACTGCTCCACATGGAAGACAC
CCTGCACCAGAGAATTATCGGTCAGGAAGACGCAGTGAAAGCCATTTCCCGCGCCATTCGTCGTGCCAGAGTGGGCTTGA
AAAATCCCAACCGTCCCATTGCTTCCTTCATCTTCTCTGGGCCCACTGGAGTAGGAAAAACCGAACTTACCAAAGCCTTG
GCTACCTACTTCTTTGGTTCCGAAGACTCCATGATTCGCTTGGATATGTCCGAGTATATGGAACGTCACACCGTATCCAA
ATTAATCGGCTCTCCTCCCGGATATGTGGGTTATAGCGAAGGTGGACAACTCACCGAAGCAGTCCGTCGTCGCCCCTATA
CCGTGGTACTGTTTGATGAAATCGAAAAAGCACATCCCGATGTATTTAACCTCCTCCTACAAATTCTTGAGGATGGACGT
TTAACCGATGCCAAAGGGCGCACCGTTGATTTCAAAAATACCCTCCTTATCATGACTTCCAACATTGGTTCTAAGGTCAT
CGAAAAAGGTGGCGGTGGATTAGGGTTTGAGCTTGAAGACGATCAAACCGAGTCTCAGTACAACCGTATTCGTTCCTTGG
TTAACGAAGAGTTGAAAAACTACTTCCGTCCTGAATTCCTCAACCGTCTTGATGAAATCATCGTCTTCCGTCAACTCAAC
AAAGAGGAAGTCAAGGAAATCTCCGAACTCTTACTCAAAGAAGTATTTGCCCGTCTCACTGAGCAGGAAATTACTTTACA
AGTAACGGATAAATTTAAAGAGCGTTTGGTGGAAGAAGGATATAACCCTGCCTATGGCGCCCGTCCATTACGTCGTGCCA
TCATGCGTCTCTTGGAAGATGTATTGGCGGAGGAAATTCTGTCCAAACGTCTCAAGGAAGGAGATACTGCCCTCGTGGAT
GTGAACGAAGAAGGCAAAGTAACTATTAAAGCTGAAGAAAATACAACTCCTTTACTTGCCAAGGCAGGTAGTTAG

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKPMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLGKVRTQVIRMLGETESAPVGAGGGSRSNK
TPTLDEFGSNLTNLATEGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIGNKDVPDLLEDKRV
VTLDIGLLVAGTKYRGEFEERLKKIMEEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDE
YRKHIERDAALARRFQPVMVGEPSVDETIEILFGLRERYEQHHKLKISDEALDAAAKLSDRYISDRYLPDKAIDLIDEAG
SRVRLLNSQLPAEAKELDKELRQVLKEKDEAVRSQDFDKAGELRDREMEIKTEIRGLADQKKQNPDVSDNPVVNEEEIAQ
IVASWTGVPVQKLTESESEKLLHMEDTLHQRIIGQEDAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKAL
ATYFFGSEDSMIRLDMSEYMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGR
LTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFELEDDQTESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLN
KEEVKEISELLLKEVFARLTEQEITLQVTDKFKERLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSKRLKEGDTALVD
VNEEGKVTIKAEENTTPLLAKAGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyast_2459 YP_007166052.1 ATPase VFG0079 Protein 0.0 60
Cyast_2459 YP_007166052.1 ATPase VFG0080 Protein 2e-155 52