Gene Information

Name : Cyast_1956 (Cyast_1956)
Accession : YP_007165558.1
Strain : Cyanobacterium stanieri PCC 7202
Genome accession: NC_019778
Putative virulence/resistance : Virulence
Product : urease
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.5
Position : 2172152 - 2173864 bp
Length : 1713 bp
Strand : -
Note : PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit; COGs: COG0804 Urea amidohydrolase (urease) alpha subunit; InterProIPR005848:IPR011612:IPR006680:IPR017950:IPR 017951:IPR017952; KEGG: mar:MAE_61330 ureas

DNA sequence :
ATGAGCTATTACATGGATAGAAGGGCTTACGCCGAAACCTATGGACCTACTAAAGGCGATCGCTTCAGGTTAGCTGATAC
AGAATTGTTTATCGAAGTAGAGGAAGACTATACCGTCTATGGAGATGAGGTAAAATTTGGGGGCGGTAAAGTCATTCGTG
ATGGCATGGGGCAGTCGGGCATTTCTAGGGCAGATGGGGCAGTGGACACAGTCATTACCAATGCTCTAATTCTTGATTGG
TGGGGGATCGTCAAAGCAGACATAGGTATCAAGGACGGCAAAATATGCACCATAGGCAAAGCAGGAAATCCCGATATTCA
ACCTAATGTAGATATAATTATTGGTCCGGGTACCGAAGCCATTGCAGGGGAGGGGATGATTCTCACCGCTGGGGGAATTG
ATACCCACATTCATTTTATCTGTCCTCAACAAATTGAAACAGCCCTCGCCTCGGGTATTACCACCATGATTGGCGGAGGC
ACAGGCCCTGCGACGGGTACCAATGCCACCACCTGCACCCCTGGAGAGTGGCACATGGCGAGGATGTTGGAATCGGCAGA
TGCCTTTGCCATGAACTTGGGTTTTTTGGGCAAAGGAAACAGTAGTCAGGAAGCAGGGTTAATTGAACAAATCAAAGCAG
GGGCGATCGGTTTAAAACTGCATGAGGATTGGGGTACAACTCCCTGGACTATCGACACTTGCCTATCGGTAGCAGATAAA
TATGATGTGTCGGTGGCAATCCATACTGATACTCTCAATGAGGCAGGTTTTGTGGAGGAAACTATCAACGCTTTCAAAAA
TAGGGCAATCCATACCTATCACACCGAAGGAGCAGGAGGTGGTCATGCCCCTGATATTATTCGGGTATGCGGGGAAATGA
ATGTTTTGCCTTCTTCTACCAATCCCACTCGTCCTTATACCATGAATACCCTTGAAGAACATTTGGATATGCTGATGGTG
TGCCATCATCTCGATAAAAATATTCCCGAGGATGTAGCTTTTGCGGAGTCTCGTATTCGTCGGGAAACCATTGCGGCGGA
GGATATTCTCCATGATTTGGGGGCTTTTAGTATGATCGCCTCGGATTCTCAGGCGATGGGTAGGGTAGGGGAGACGATTA
TTCGTACTTGGCAGACTGCCCATAAAATGAAGGTACAAAGGGGAGTTTTGAGTTCTTCGGACAATTCCCCTGCGGATAAT
TTTCGAGCCAAAAGATATGTGGCGAAATATACCATCAATCCTGCTATTACCCATGGAGTAGCGGATCATGTGGGTTCGGT
GGAGGTGGGTAAATTGGCGGATTTAGTGTTATGGAAACCTGCTTTTTTTGGGGTAAAACCTGAATTGGTGATCAAAGGAG
GGGTGATCGCCTTTGCCCAGATGGGTGATGCTAATGCTAGTATTCCTACCCCTCAGCCTATCCACTCTCGCCCCATGTTT
GCTAGTTTTGGCGGTGCGATCGCCTCTACATCCTTAACCTTCATTTCCCAAGTCGCTCAACAATTAGACATCAAAAGTAA
ATTAGGCTTACAAAAACCCACCGTTGTAGTCAAAAATACCCGCACCATCACCAAAGCAGACATGAAATTAAACGCCTATA
CCCCCAAAATAGATGTGGATCCTGAAACCTACGAAGTTAGAGCCGACGGGGAACTTTTGACCTGCGAACCTGCTTCTGTG
TTACCCATGGCGCAAAGATACTTTTTGTTTTAA

Protein sequence :
MSYYMDRRAYAETYGPTKGDRFRLADTELFIEVEEDYTVYGDEVKFGGGKVIRDGMGQSGISRADGAVDTVITNALILDW
WGIVKADIGIKDGKICTIGKAGNPDIQPNVDIIIGPGTEAIAGEGMILTAGGIDTHIHFICPQQIETALASGITTMIGGG
TGPATGTNATTCTPGEWHMARMLESADAFAMNLGFLGKGNSSQEAGLIEQIKAGAIGLKLHEDWGTTPWTIDTCLSVADK
YDVSVAIHTDTLNEAGFVEETINAFKNRAIHTYHTEGAGGGHAPDIIRVCGEMNVLPSSTNPTRPYTMNTLEEHLDMLMV
CHHLDKNIPEDVAFAESRIRRETIAAEDILHDLGAFSMIASDSQAMGRVGETIIRTWQTAHKMKVQRGVLSSSDNSPADN
FRAKRYVAKYTINPAITHGVADHVGSVEVGKLADLVLWKPAFFGVKPELVIKGGVIAFAQMGDANASIPTPQPIHSRPMF
ASFGGAIASTSLTFISQVAQQLDIKSKLGLQKPTVVVKNTRTITKADMKLNAYTPKIDVDPETYEVRADGELLTCEPASV
LPMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 4e-174 68
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 4e-174 68
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-162 64
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-163 64
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-163 64
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-163 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyast_1956 YP_007165558.1 urease VFG0270 Protein 7e-156 64