Gene Information

Name : Cyast_0149 (Cyast_0149)
Accession : YP_007163781.1
Strain : Cyanobacterium stanieri PCC 7202
Genome accession: NC_019778
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 161534 - 164167 bp
Length : 2634 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAGCCAACTGATCCGAATAAATTTACTGAGAGTGCTTGGGATGCCGTAGTGCGATCGCAAGAAGTATGTCGTAATTT
CAAAAATCAAAACTTAGAAGTAGAACACCTCATTTTGGCGTTGTTAGAAGAAAACACCATCGCCGGGCAAATATTCACCC
AAGCCAAGATAGATTTACCTACCCTCGAAAAACAATTACGCACCTTTGCCACTCGTCAGCCAAAAATGTTCAGTGTCAAT
CAACTGTATCTCGGGCGGGGTTTAGACTTATTATTAGACAGGGCAGAAGCCTGTCGTGAGAGTTGGCAGGATGACATTAT
CGGTGTATCCCATATCCTCACCGCTTTTTCTGAAGATGAGCGCATCGGTAAACGTACCCTACGCACTTTCAACCTTGACG
CGCAAGATTTTCAGTTACAAATAAAGTCTTTTAAAACCAGCATCGAACAGGCAGAGGAAACCAGTCAACCCCCAGAAAAT
CAGGAAGCGGAAGAAAAAGAAGGCGCTCCCCTCGATAAATATGGTCGAGATTTGACCGAACAAGCTAAGGCTGGAAAACT
TGACCCCGTCATTGGTAGGGATGATGAAATTAGGCGGGTAATTCAAGTTTTATCCCGTCGTACCAAAAATAACCCTGTGC
TTATCGGTGAGCCGGGGGTAGGAAAAACTGCCATCGCCGAGGGTTTAGCCCAAAGAATCGTCAATGGAGATGTACCAGAA
TCCCTCAAAAATCGTCAACTGATTTCCCTTGATATGGGCAGTCTCATCGCAGGGGCAAAGTATAGAGGACAGTTTGAGGA
GAGGTTGCGATCGGTATTAAAAGAAGTAATCGAGTCTGATGGGCAAATCATCCTCTTTATCGATGAACTTCATACCGTAG
TCGGTGCAGGTTCTCGGGAAGGGGGTGCCATGGATGCAGGAAACCTCCTCAAGCCTATGTTAGCGAGGGGAGAACTCCGT
TGTATCGGTGCTACCACCCTAGATGAATACCGCAAACACATCGAAAAAGATCCTGCCCTTGAGCGCCGTTTTCAACAGGT
ATATATCAAACAACCCACCGTAGAGGATACCATCTCAATTTTACGGGGTTTAAAAGAACGTTACGAAGTCCATCACGGGG
TGAAAATTACCGACTCCGCCCTCATTGCGGCGGCTACCCTCTCCCATAGATATATCACGGATCGTTTCTTGCCCGACAAA
GCCATTGATTTGGTGGATGAAGCGGCGGCACGGTTGAAAATGGAAATCACCTCCAAACCCCTAGAATTAGAGGCATTAGA
TCGCCGTCTGTTGCAGTTACAGATGGAACAGTTATCCCTCCAAGGGGAAGGTAAGGATGATAAATCTGCCCAAGAAAACC
TCGAGCGCATCGAAACGGAAATCCATGAGTTGCAAGATAGGCAAAAGGAATTATCGTCTCAATGGTTGGAGGAAAAGGAA
TTATTAGACGAAATCAAGGCTCTGAAAACCGAAGAGGAACAGGTGCGCCTAGAGTTGGATAAGGCAGAAAGGGCTTATGA
CCACGAAAAGGCGGCTCAGATAAAATACGGTAAGTTAGAAACCCTGCAACATGACATAGAAGCCAAGGAGGCGGAATTAC
TCAAAATTCAAGCCCAAGAAAACGCCATGTTACGGGAAAATGTCACCGATGCCGACATTGCCGAAATTGTGGCAGGATGG
ACAGGGATTCCTATGAATCGCCTTTTAGAAACCGAACGCCAAAAATTGCTCGAGTTAGAATCCCATCTTCAAGAGCGAGT
GGTGGGGCAGGGGGAAGCCGTATCCATTGTTTCCGCCGCCATCCGCAGGGCAAGGGCAGGAATGAAAGATCCTAGTCGTC
CTATCGGTTCATTCCTCTTCATGGGGCCCACAGGGGTCGGAAAAACTGAATTAGCAAGGGCGATCGCAGCTTTTCTGTTT
GACTCAGAAGATGCCATGGTGAGAATTGATATGTCAGAATACATGGAAAAACATTCCGTATCTCGTTTGTTGGGTGCGCC
CCCCGGCTATGTGGGTTATGAAGAAGGAGGACAACTTTCCGAAGCCATCCGCCGTCGCCCCTATTCCGTGGTGTTATTGG
ATGAAGTGGAAAAAGCCCACCGTGATGTGTTTAATATCTTGTTACAGGTATTAGACGATGGCAGAATTACCGACAGTCAA
GGGCGATTGGTGGATTTTCGCAATACCATCATCGTCATGACTTCTAATATCGGTAGTGAGTATATTTTGAATTTAGGAGA
TAACGATACCAACTATGAGCAAATGCGCAGTAAAGTTTTAACCTCCTTGCGTAAACATTTCCGCCCCGAATTTTTGAACC
GTATCGATGATTTGATTATCTTCCACAGCCTCAAAAAAGAGGAGTTACGCCATATCGTCACCCTACAACTAGCTCGTTTA
CAAAGTTTACTGGGTGAACAACAAATTAAAATCGAGCTAACCCCAGAGGCACAGGACTATATTGTCAATGTGGGTTATGA
TCCCAATTATGGCGCTCGTCCTCTGAAACGAGCAATCCAAAGGGAGTTAGAAAACCCCCTCGCCACCAAAATCCTCGATC
TCACTTTCACCGAAGGGGATACGGTGTTAGTTAAATATGAGGATGAGGAATTGGTTTTTGCCAAAGCGGAATAA

Protein sequence :
MQPTDPNKFTESAWDAVVRSQEVCRNFKNQNLEVEHLILALLEENTIAGQIFTQAKIDLPTLEKQLRTFATRQPKMFSVN
QLYLGRGLDLLLDRAEACRESWQDDIIGVSHILTAFSEDERIGKRTLRTFNLDAQDFQLQIKSFKTSIEQAEETSQPPEN
QEAEEKEGAPLDKYGRDLTEQAKAGKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNGDVPE
SLKNRQLISLDMGSLIAGAKYRGQFEERLRSVLKEVIESDGQIILFIDELHTVVGAGSREGGAMDAGNLLKPMLARGELR
CIGATTLDEYRKHIEKDPALERRFQQVYIKQPTVEDTISILRGLKERYEVHHGVKITDSALIAAATLSHRYITDRFLPDK
AIDLVDEAAARLKMEITSKPLELEALDRRLLQLQMEQLSLQGEGKDDKSAQENLERIETEIHELQDRQKELSSQWLEEKE
LLDEIKALKTEEEQVRLELDKAERAYDHEKAAQIKYGKLETLQHDIEAKEAELLKIQAQENAMLRENVTDADIAEIVAGW
TGIPMNRLLETERQKLLELESHLQERVVGQGEAVSIVSAAIRRARAGMKDPSRPIGSFLFMGPTGVGKTELARAIAAFLF
DSEDAMVRIDMSEYMEKHSVSRLLGAPPGYVGYEEGGQLSEAIRRRPYSVVLLDEVEKAHRDVFNILLQVLDDGRITDSQ
GRLVDFRNTIIVMTSNIGSEYILNLGDNDTNYEQMRSKVLTSLRKHFRPEFLNRIDDLIIFHSLKKEELRHIVTLQLARL
QSLLGEQQIKIELTPEAQDYIVNVGYDPNYGARPLKRAIQRELENPLATKILDLTFTEGDTVLVKYEDEELVFAKAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-104 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyast_0149 YP_007163781.1 ATP-dependent chaperone ClpB VFG2084 Protein 3e-108 41
Cyast_0149 YP_007163781.1 ATP-dependent chaperone ClpB VFG2076 Protein 5e-116 41