Gene Information

Name : Cyan10605_3342 (Cyan10605_3342)
Accession : YP_007163428.1
Strain : Cyanobacterium aponinum PCC 10605
Genome accession: NC_019776
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3961187 - 3963820 bp
Length : 2634 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAGCCAACTGATCCAAATAAGTTTACTGAAATTGCTTGGGATGCGATCGTGCGATCGCAAGAAATTTGTAAGGAGTT
AAAAAACCAAAATTTAGAGGTAGAACATTTAATCCTTGCTTTATTAGCAGAAGATACCATTGCTGTACAAATATTCCAAA
AGGCTAACGTTGAAATTAACAGGTTACAGAAACAACTACAAACCTTTGCTACCCGTCAACCGAGAATGTATAGTGTGGAT
CAGTTATACTTAGGACGTAGTTTAGATCAAATGCTCGATCGCGCCGAGAATTGTCGGGTTAGTTGGCAGGATGAATATAT
CGGAGTTTCTCACTTATTGGTTGCCTTTGCGGATGATCAAAGAATCGGAAAAAAAACCTTACGCAGTTTTAACCTCGATC
CCCAAGACTTTGAGCAGAAAGTAAGAGATTTCAAAGTTAAAATCGAGAAAATGGAAGCAGAAACCGAAGAAAAGACTGAA
AAAACTGAATCTGAACCATCTTTAACTAAATTTGGACGGGATTTAACCGAAGAAGCCAGAGCCGGAAAACTTGATCCCGT
TATCGGTAGGGATGAAGAAGTGCGTCGAGTAATTCAAGTATTGTCCAGACGTTCCAAAAATAACCCTGTGTTGATTGGTG
AGCCGGGAGTAGGAAAAACTGCGATCGCAGAAGGATTGGCGCAGAGAATTGTTAATGGTGATGTACCGGATTCTCTTAAA
GATAGACAACTGATTTCCCTTGATATGGGAAGTTTAATCGCAGGGGCGAAATATCGGGGGCAATTTGAAGAAAGATTGAG
GGGTGTATTAAAAGAAGTCATCAACTCCGATGGACAGATTATTTTATTTATAGATGAATTACATACTGTAGTCGGTGCGG
GTTCACGGGAAGGAGGAGCGATGGATGCAGGAAACCTTCTCAAACCCATGTTAGCAAGGGGAGAATTGCGTTGTATTGGG
GCGAGTACCCTTGATGAGTATCGGAAACACATTGAAAAAGATCCAGCCCTTGAAAGGCGTTTTCAGCAAGTCTATGTCAA
ACAACCTAGCGTTGAGGATACCATCTCCATTTTAAGAGGTTTAAAAGAGCGTTACGAAGTCCATCACGGGGTAAAAATCA
ACGACTCTGCTTTAGTGGCGGCGGCAACTTTATCCCATCGTTATATCACAGGGCGCTTTTTACCCGACAAAGCCATTGAT
TTAGTGGATGAGGCGGCGGCTAAATTAAAGATGGAAATTACCTCTAAACCCGTGGAGTTAGAAAACCTCGATCGCCGTTT
GATGCAATTAGAGATGGAAAAACTATCTCTGTCTGGGGAAGGAAAAAACGATAAAATGACCCTTGAAAACCTCGATCGCA
TTTCCAAAGAAATAGAAGAATTGAAAAAGAAACAGAGGGAATTGTCATCCCAATGGCAAATCGAGAAAGAATTTTTAGAC
GAAATTAACGCCCTCAAAGAAGAAGAAGAAGAACTGCGTTTGCAAGTAGAACAGGCAGAAAGGGCTTATGATCTAAATAC
TGCCGCTCAACTTAAATATGGCAAACTAGAAACCCTACAACAAGATATAGAGGCAAAAGAGGCGAAATTACTGGAAATTC
AATCCCAAGAAAACGCCATGTTGAGGGAAGATGTTACCGAAGCAGACATAGCCGAAATTGTGGCAGGATGGACAGGGATA
CCCCTCAATCGCCTTTTAGAAACCGAAAGACAAAAACTCCTCGAATTAGAATCCCATCTCCATGAAAGAGTAATCGGACA
AACCGAGGCGGTATCTATCGTTTCAGCCGCCATTAGACGTGCGAGGGCGGGAATGAAAGACCCTAATAGACCGATCGGGT
CATTTTTGTTCATGGGACCTACAGGAGTCGGAAAAACAGAATTAGCTAGGGCTTTAGCAGGTTTCCTCTTTGACTCCGAA
GACGCAATGGTGAGGATTGATATGTCAGAGTACATGGAGAAACACGCAGTTTCCCGTCTTATTGGCGCACCACCGGGGTA
TGTAGGCTATGAAGAAGGAGGACAATTATCGGAAGCCATACGTCGTCGCCCTTACTCAGTGGTATTGTTAGATGAGGTGG
AAAAGGCACATAGAGATGTCTTTAATATTCTTTTGCAGGTGTTAGACGATGGTAGAATTACCGACAGTCAGGGACGTTTA
GTAGATTTCCGTAATACTATTATTGTTATGACATCAAATATCGGCAGTGAATACATCCTCCAATTAGCAGGGGATGATAA
CAATTATGAACCGATGAAAGATAAAGTATTAGTGGCATTAAGAAAGCACTTTCGTCCTGAATTTCTCAACCGTATTGATG
ATTTAATCATTTTCCACGGCTTGAAAAAAGATGAGTTAAGGCACATTGTTACTTTACAACTCAAACGCCTTGAGAATCTG
TTGAGTGAGCAAAGAATTGCCATTGAATTAACCCCAGAAGCACAGGATTATATCGTTAATGTGGGGTATGATCCTATCTA
TGGCGCCCGTCCCTTAAAACGAGCAATACAAAGAGAATTAGAAAATCCTCTTGCCACGAAAATCTTAGAAATGGCTTTTA
CAGAAGGGGATACAGTGTTAGTAAGTTTTGAAAAAGATCATCTAGTCTTTAGTAAGAAAGAGGAAGTCAATTAA

Protein sequence :
MQPTDPNKFTEIAWDAIVRSQEICKELKNQNLEVEHLILALLAEDTIAVQIFQKANVEINRLQKQLQTFATRQPRMYSVD
QLYLGRSLDQMLDRAENCRVSWQDEYIGVSHLLVAFADDQRIGKKTLRSFNLDPQDFEQKVRDFKVKIEKMEAETEEKTE
KTESEPSLTKFGRDLTEEARAGKLDPVIGRDEEVRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIVNGDVPDSLK
DRQLISLDMGSLIAGAKYRGQFEERLRGVLKEVINSDGQIILFIDELHTVVGAGSREGGAMDAGNLLKPMLARGELRCIG
ASTLDEYRKHIEKDPALERRFQQVYVKQPSVEDTISILRGLKERYEVHHGVKINDSALVAAATLSHRYITGRFLPDKAID
LVDEAAAKLKMEITSKPVELENLDRRLMQLEMEKLSLSGEGKNDKMTLENLDRISKEIEELKKKQRELSSQWQIEKEFLD
EINALKEEEEELRLQVEQAERAYDLNTAAQLKYGKLETLQQDIEAKEAKLLEIQSQENAMLREDVTEADIAEIVAGWTGI
PLNRLLETERQKLLELESHLHERVIGQTEAVSIVSAAIRRARAGMKDPNRPIGSFLFMGPTGVGKTELARALAGFLFDSE
DAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLSEAIRRRPYSVVLLDEVEKAHRDVFNILLQVLDDGRITDSQGRL
VDFRNTIIVMTSNIGSEYILQLAGDDNNYEPMKDKVLVALRKHFRPEFLNRIDDLIIFHGLKKDELRHIVTLQLKRLENL
LSEQRIAIELTPEAQDYIVNVGYDPIYGARPLKRAIQRELENPLATKILEMAFTEGDTVLVSFEKDHLVFSKKEEVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-106 44
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 5e-107 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-107 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan10605_3342 YP_007163428.1 ATP-dependent chaperone ClpB VFG2076 Protein 5e-116 43
Cyan10605_3342 YP_007163428.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-107 43