Gene Information

Name : Cyan10605_0272 (Cyan10605_0272)
Accession : YP_007160466.1
Strain : Cyanobacterium aponinum PCC 10605
Genome accession: NC_019776
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 342192 - 343574 bp
Length : 1383 bp
Strand : -
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; COGs: COG0422 Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: npu:Npun_R3700 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosyn

DNA sequence :
ATGCGTACAGAATGGATAGCGAAACGTCGTGGACAAGCTAACGTGTCTCAAATGCACTATGCTCGTCAAGGTGTTATTAC
CGAAGAAATGCACTATGTAGCGACAAGAGAAAACTTACCTGCCGAGTTGATTCGAGATGAAGTGGCAAGGGGCAGAATGA
TTATTCCTGCTAATATTAATCACCCCAATCTTGAGCCTATGTGCATTGGTATTGCCTCTAAGTGTAAGGTAAATGCGAAT
ATTGGTGCTTCTCCTAACTCGTCCAATATTGATGAGGAGGTAGCTAAATTAAACTTAGCGGTAAAATATGGTGCAGATAC
CGTCATGGATTTATCCACTGGGGGCGGTAATTTAGATGAAATTCGCACAGCAATTATTAATGCTTCTCCAGTACCCATTG
GTACAGTTCCTATTTACCAAGCCCTAGAAAGTGTACACGGAAAAATCGAAAATCTTACCGCCGATGACTTTTTACACATC
ATCGAAAAACACGCTCAACAAGGTGTTGATTATATGACTATTCATGCAGGTATTTTAATTGAATACTTGCCTTTAGTACG
TAATCGTATCACTGGTATTGTGTCCCGTGGTGGTGGTATTATTGCCCGTTGGATGTTGCATCATCATAAACAAAATCCCC
TTTACACCCATTTTGATGATATTATCGAAATCTTTAAGAAATATGATGTTTCTTTCAGTTTGGGTGATTCTTTACGCCCC
GGTTGTACCCATGATGCTTCTGATGAGGCTCAATTATCAGAGTTAAAAACTTTAGGACAATTAACTCGCCGTGCGTGGGA
ACATGATGTACAAGTAATGGTAGAAGGTCCTGGCCATGTACCCATGGATCAAATTGAGTTCAATGTGAAAAAACAAATGG
AAGAATGCTCAGAGGCTCCTTTCTATGTTTTGGGTCCTTTGGTGACAGATATTGCTCCCGGTTATGATCATATCACAAGT
GCGATCGGAGCGGCTATGGCTGGTTGGTATGGTACTGCGATGCTATGCTATGTTACCCCTAAAGAACATTTGGGCTTACC
TAACGCCGAAGATGTCCGTAATGGCTTAATTGCTTATAAAATTGCGGCTCATGCGGCAGATATTGCCCGTCATCGCCCCG
GTGCAAGAGATAGAGATGATGAACTTTCTAAAGCTCGTTATAACTTTGACTGGAATCGTCAATTTGAGCTATCTTTAGAT
CCAGACAGGGCAAGAGAATACCATGATGAGACATTACCTGCGGATATTTATAAAGAAGCAGAATTTTGTTCTATGTGTGG
TCCTAAATTCTGTCCTATGCAAACTAAAGTAGATGCGGATGCTTTAACAGAGTTGGAAAAATTCTTAGCAAAAGAGGCTA
GTAGTAAGCAACCTGTGGCATAG

Protein sequence :
MRTEWIAKRRGQANVSQMHYARQGVITEEMHYVATRENLPAELIRDEVARGRMIIPANINHPNLEPMCIGIASKCKVNAN
IGASPNSSNIDEEVAKLNLAVKYGADTVMDLSTGGGNLDEIRTAIINASPVPIGTVPIYQALESVHGKIENLTADDFLHI
IEKHAQQGVDYMTIHAGILIEYLPLVRNRITGIVSRGGGIIARWMLHHHKQNPLYTHFDDIIEIFKKYDVSFSLGDSLRP
GCTHDASDEAQLSELKTLGQLTRRAWEHDVQVMVEGPGHVPMDQIEFNVKKQMEECSEAPFYVLGPLVTDIAPGYDHITS
AIGAAMAGWYGTAMLCYVTPKEHLGLPNAEDVRNGLIAYKIAAHAADIARHRPGARDRDDELSKARYNFDWNRQFELSLD
PDRAREYHDETLPADIYKEAEFCSMCGPKFCPMQTKVDADALTELEKFLAKEASSKQPVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 1e-129 65
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 1e-129 65
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 6e-124 57