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Name : Cyan10605_1886 (Cyan10605_1886) Accession : YP_007162029.1 Strain : Cyanobacterium aponinum PCC 10605 Genome accession: NC_019776 Putative virulence/resistance : Unknown Product : ssrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 2258538 - 2258996 bp Length : 459 bp Strand : + Note : PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: cyt:cce_3267 SsrA-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding DNA sequence : ATGAGTGACAAAGTGAAGATAATTAGTGATAATCGTCAGGCAAGATATTTATATGAGATTTTAGAGACTTATGAGGCAGG AGTCCAATTAGTGGGTACGGAAGTTAAGTCTATTAGGGCAGGAAGAGTCAATTTAAGAGATGGTTATGCTTTAATTCGTA ATGGGGAGGCTTGGTTAACTAATGTGCATATTTCTCCTTATGATACCACTGGTAAATATTTTAATCATGAACCAAAGCGC GATCGCAAATTGTTATTACATAAAAAAGAAATTAATAAGTTAATTGGTGCATTACAGGAAAAAGGTTTAACTTTAGTTCC GTTAAAGATGTATTTGAGAGGAGAATGGGTTAAAGTTAGTTTAGGGCTAGGTAAAGGGAAAAAACTTCATGATAAAAGAG AAACCATTAAACGTAGGGAAGATCAAAGAGAAATGCAAAGGGCATTGAAAAGATTTTAG Protein sequence : MSDKVKIISDNRQARYLYEILETYEAGVQLVGTEVKSIRAGRVNLRDGYALIRNGEAWLTNVHISPYDTTGKYFNHEPKR DRKLLLHKKEINKLIGALQEKGLTLVPLKMYLRGEWVKVSLGLGKGKKLHDKRETIKRREDQREMQRALKRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 3e-26 | 50 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 3e-29 | 50 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 4e-20 | 42 |
