Gene Information

Name : Cyan10605_1666 (Cyan10605_1666)
Accession : YP_007161815.1
Strain : Cyanobacterium aponinum PCC 10605
Genome accession: NC_019776
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1993162 - 1994145 bp
Length : 984 bp
Strand : +
Note : PFAM: Periplasmic solute binding protein family; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: cyt:cce_1242 Mn2+ ABC transporter, periplasmic binding protein; PFAM: ABC transporter metal

DNA sequence : 
ATGATAAGGTTTTCACAATCTCAAAATAAACTTTTAATATTTACTGTTTTACTGGGATTTGCTTTGATAGGGTGTAATGG
CTCGTCAGAAATAAACCAGAGCAGTAATCCAGAAAGTGAACAAATAAATAATACAGAGTTGAATAATGAGCAAGGAAAAA
AGAAGGTTTTAACTAGCTTCACTATCTTAGCTGACATGGCGAAAAATGTGGCTGGAGATAAATTAATTGTTGAATCAATA
ACCCGTGTTGGGGCTGAAATTCACGGTTATGAGCCTACTCCTAGTGATCTAGTGAAAGCTGAATCAGCGGATTTAGTTCT
TTATAATGGCATGAATTTAGAACGCTGGATGGAACAATTTTTAGGAAATGTGCAAGATGTTCCTTCTGTCGTATTAACTG
AAGGTATTGAACCAATTCCGATTAAAGAAGGTGCTTATATCAATAAGCCAAATCCTCATGCTTGGATGTCTCCCCAAAAT
GCTTTAATTTATGTGGAGAATATTCGTCAGGCTTTTGTGGAATTAGATCCAGAGAATGCTGATACTTATAATAATAATGC
AAAGGTTTATAGCGATAAAATCAAAGAACTCGATCGCATCTTAGAGTCTGATTTAGCGAGGATTCCCGAAGATAAAAGAT
ATTTAGTCAGTTGCGAAGGGGCGTTTTCCTATTTAGCCAGAGATTACGACTTAAAAGAGATTTATCTATGGCCTATCAAT
GCTGAACAACAATTCACCCCGAAACAGGTGCAATCGGTGATTGAAAAAGTTGAAGCGAATAATATTCCTACTATTTTTTG
TGAAACTACTGTCAATGATGAAGGACAAAAACAAGTGGCAAAAACTACAGGGGCAAGATTTGGCGGAAATCTATATGTGG
ATTCTCTTTCAAGTGAAGAAGGTGCAGTGCCGACTTATCTGGACTTATTAGAATACGATATTCGCACTATTACTAATGGT
TTGTTAGCAGGAGTGAACAATTAA

Protein sequence : 
MIRFSQSQNKLLIFTVLLGFALIGCNGSSEINQSSNPESEQINNTELNNEQGKKKVLTSFTILADMAKNVAGDKLIVESI
TRVGAEIHGYEPTPSDLVKAESADLVLYNGMNLERWMEQFLGNVQDVPSVVLTEGIEPIPIKEGAYINKPNPHAWMSPQN
ALIYVENIRQAFVELDPENADTYNNNAKVYSDKIKELDRILESDLARIPEDKRYLVSCEGAFSYLARDYDLKEIYLWPIN
AEQQFTPKQVQSVIEKVEANNIPTIFCETTVNDEGQKQVAKTTGARFGGNLYVDSLSSEEGAVPTYLDLLEYDIRTITNG
LLAGVNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-78 57
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-78 57
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-78 57
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-78 57
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-78 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan10605_1666 YP_007161815.1 periplasmic solute binding protein BAC0439 Protein 1e-82 60
Cyan10605_1666 YP_007161815.1 periplasmic solute binding protein BAC0349 Protein 8e-79 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan10605_1666 YP_007161815.1 periplasmic solute binding protein VFG0525 Protein 8e-79 57