Gene Information

Name : Cyan10605_1525 (Cyan10605_1525)
Accession : YP_007161678.1
Strain : Cyanobacterium aponinum PCC 10605
Genome accession: NC_019776
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1829786 - 1830520 bp
Length : 735 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: cyh:Cyan8802_2

DNA sequence :
TTGGAAACTCAAAAAGAGAAAATTTTAGTAGTTGACGATGAAGCAAGTATTCGCCGTATTTTAGAAACTCGTCTCTCGAT
GATTGGTTATGATGTTGTCACTGCCGCTGATGGAGAAGATGCGATCGCAACTTTTCATGAAACTCAACCAGATTTAGTGG
TTTTAGACGTAATGATGCCCAAATTAGACGGCTATGGAGTTTGTCAAGAACTAAGAAAAGAATCTGATATACCCATTATT
ATGTTAACTGCTTTAGGAGATGTAGCAGATCGCATTACAGGTTTAGAGCTAGGAGCAGATGATTATGTGGTAAAACCTTT
CTCTCCCAAAGAATTAGAAGCAAGAATCCGCTCTGTGTTAAGAAGAGTTGACAAAACAGGAGTTGCAGGAATACCTAGTT
CGGGAGTTATCTCCATTAACTCTATCAGAATTGACACCAACAAAAGACAGGTTTACAAAGGAGATCAAAGAATCCGCTTA
ACAGGAATGGAATTTAGCTTACTAGAACTGCTTGTAAGTAAATCAGGAGAACCTTTTTCTCGCTCAGAAATCTTACAGGA
GGTTTGGGGATATACACCTGAGCGTCATGTCGATACTAGAGTTGTGGACGTTCACGTATCCCGTTTAAGAGCAAAATTAG
AAGATGACCCTAGCAATCCTGAACTGATTTTAACCGCTAGAGGTACAGGATATTTGTTTCAAAGGATATTAGAACCGGGA
GAAAAGAAAAAGTAG

Protein sequence :
METQKEKILVVDDEASIRRILETRLSMIGYDVVTAADGEDAIATFHETQPDLVVLDVMMPKLDGYGVCQELRKESDIPII
MLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKTGVAGIPSSGVISINSIRIDTNKRQVYKGDQRIRL
TGMEFSLLELLVSKSGEPFSRSEILQEVWGYTPERHVDTRVVDVHVSRLRAKLEDDPSNPELILTARGTGYLFQRILEPG
EKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-28 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 1e-42 48
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 1e-42 48
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 1e-42 48
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 1e-42 48
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 1e-42 48
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 1e-42 48
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 1e-42 48
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 2e-42 48
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 9e-43 48
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 1e-42 48
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 5e-39 46
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 2e-36 46
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 7e-39 45
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator BAC0125 Protein 6e-35 44
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator CP000034.1.gene3671. Protein 5e-36 43
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator BAC0083 Protein 3e-32 41
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator CP000675.2.gene1535. Protein 1e-34 41
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator BAC0638 Protein 1e-24 41
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 2e-35 41
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 3e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator VFG1390 Protein 3e-37 43
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator VFG0596 Protein 3e-28 42
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator VFG1386 Protein 1e-33 41
Cyan10605_1525 YP_007161678.1 winged helix family two component transcriptional regulator VFG1389 Protein 1e-29 41