Gene Information

Name : Cyan10605_1101 (Cyan10605_1101)
Accession : YP_007161267.1
Strain : Cyanobacterium aponinum PCC 10605
Genome accession: NC_019776
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1334365 - 1336986 bp
Length : 2622 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAACCAACAAATCCACAACAATTTACAGAAAAAGCATGGGAGGCAATAGTCAAAACTCCCGACATTGCCAAACAAAG
TCAACACCAGCAAATTGAGTCAGAGCATCTGTTAAAATCTCTTTTAGAACAACAGGGATTAGCTACAAGTATCTTTAATA
AAGCTGATATTAGTTTAACTCGTTTGCGCGATCGCACCGATGAATTTATCAATCGTCAACCGAAGGTTAAAAACGTTTCT
GACTCGGTATATTTAGGAAAAAGCCTTGATACTCTTTTAGATAGGGCAGAAAAATACCGCAAAGAATTTGAAGATGATTT
CATTTCCATTGAACATATTATCTTAGGTTATGCCCAAGACGAACGTTTTGGGAAAAATTTATTAAGAGAATTTAATCTCG
ATGAAAATCAACTAAAAACTATCATTAAAGAAATTAGAGGAAGCCAGAAAGTGACCGATCAAAATCCTGAAGGAAAATAC
GAATCTTTGACTAAATATGGTCGAGATTTAACAGAATTGGCAAGACAAGGGAAGTTAGATCCCGTTATCGGTAGAGATGA
TGAAGTCCGTCGTACTATTCAAATTCTGTCCCGTCGCACGAAAAATAACCCTGTGTTAATTGGTGAGCCGGGGGTAGGAA
AAACTGCGATTGTAGAAGGATTAGCCCAACGTATTATAAACCGAGATGTACCCGAATCATTGCTCGATCGCACTCTTATT
GCCTTAGACATGGGTGCATTGATTGCAGGGGCGAAATATCGAGGAGAATTTGAAGAAAGACTCAAAGCCGTCTTGAAAGA
AGTTACCGAATCCGAGGGTAATATCATCCTTTTTATCGATGAGATACATACCGTTGTCGGTGCAGGAGCGACTCAAGGGG
CAATGGATGCAGGAAACCTCTTAAAACCGATGTTAGCAAGGGGAGAATTACGTTGTATCGGGGCGACAACTCTCGATGAA
TACCGTAAATATATTGAGAAAGATGCAGCACTAGAAAGACGTTTTCAATCGGTATATGTAGGCGAACCTAATGTCATTGA
TACTATCTCTATTTTAAGGGGATTAAAAGAACGTTATGAAGTACATCATGGGGTTAAAATTGCTGACAATGCCCTCGTAG
CGGCGGCAATGTTGTCGAATCGCTATATTACAGATCGCTTTTTGCCAGATAAAGCCATTGATTTAGTGGATGAATCGGCG
GCAAAGTTGAAAATGGAAATAACTTCTAAACCCGAAGAATTGGACGAAGTCGATCGCAAAATCCTCCAATTAGAGATGGA
AAGATTATCATTGAAAAAAGAAGATGATCCTGCATCAAAAGAGAGATTAGCAAAGCTAGAGCAAGAATTAGGAAATTTGA
AAGAGCAACAATCAGCTTTTAATGCTCAATGGCAGTCTGAAAAGGATATTATCGATGAAATTCGCAATTTACGGGAATCG
ATAGAAAGAGTTAATGTGGAAATTCAACAGGCGGAAAGAGATTATGATTATAATAAAGCCGCCGAGTTGCGTTACGGCAA
ATTAAACGATTTACAACAGCAAATCAAAGATAAAGAAACTGCCCTAGCAGAAAAACAAACTACAGGTAAATCCCTCTTGC
GGGAAGAAGTGGAAGAATCAGACATTGCGGAAATTATCTCAAAATGGACTGGTATTCCCATTAGTAAATTAGTTGAATCA
GAAAAAGAAAAATTATTGCACCTTGAATCTCAACTTCATGAGCGAGTAATTGGGCAAGATGAAGCAGTTATCGCTGTTTC
TGAGGCTATACAACGCTCTCGTGCTGGTTTAAGCGATCCTAATCGCCCTACCGCTAGTTTTATCTTTTTAGGTCCTACGG
GTGTCGGTAAAACGGAATTAGCGAAGGCTTTAGCTGGTATTCTCTTTGACACTGAAGAGGCGATCGTGCGTATTGATATG
TCTGAATATATGGAGAAACACACTGTTTCCCGTTTAATGGGAGCGCCTCCGGGGTATGTAGGTTATGAAGAAGGAGGGCA
ATTAACCGAAGCCATTCGCCGTCGCCCTTACTCGGTGGTATTATTTGATGAAATTGAAAAAGCCCATCCTGATGTGTTTA
ACGTCATGTTGCAGATTCTTGATGATGGCAGATTGACGGATTCTCAGGGACGCACTGTGGACTTTTCTAATACCATTATT
ATCATGACCTCCAATATTGGATCGCAATTTATCCTTGATGTGTCAGGGGATGATAGTAAATATGAACAGATGCGTAGCCG
AGTAATGGATGCGATGAGAGCGAATTTCCGTCCAGAATTCCTTAACCGTATTGATGAAATTATCATCTTCCATAGTTTGG
AAAAATCCCAGCTACGTCATATCGTTAAATTGCAAGTTGCCCGTTTAGAAACTCGTTTAGCAGAACAAAAATTATCTCTC
TCTTTATCTGAATCTGCTTTAGACTTCCTTGCAGAAATTGGCTATGATCCTGTTTATGGTGCTAGACCTCTCAAACGTGC
AGTACAAAAATACTTGGAAACTGCGATCGCAAAATCTATATTAAAAGGTGAATTTAAAGACGGAGACACCATTTTTGTGG
ATGTAGAAGACGAGAGATTGAGTTTAAAGCGTTTGCCTGATGACTTATTAATTAAATCTTAA

Protein sequence :
MQPTNPQQFTEKAWEAIVKTPDIAKQSQHQQIESEHLLKSLLEQQGLATSIFNKADISLTRLRDRTDEFINRQPKVKNVS
DSVYLGKSLDTLLDRAEKYRKEFEDDFISIEHIILGYAQDERFGKNLLREFNLDENQLKTIIKEIRGSQKVTDQNPEGKY
ESLTKYGRDLTELARQGKLDPVIGRDDEVRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIINRDVPESLLDRTLI
ALDMGALIAGAKYRGEFEERLKAVLKEVTESEGNIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQSVYVGEPNVIDTISILRGLKERYEVHHGVKIADNALVAAAMLSNRYITDRFLPDKAIDLVDESA
AKLKMEITSKPEELDEVDRKILQLEMERLSLKKEDDPASKERLAKLEQELGNLKEQQSAFNAQWQSEKDIIDEIRNLRES
IERVNVEIQQAERDYDYNKAAELRYGKLNDLQQQIKDKETALAEKQTTGKSLLREEVEESDIAEIISKWTGIPISKLVES
EKEKLLHLESQLHERVIGQDEAVIAVSEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAGILFDTEEAIVRIDM
SEYMEKHTVSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVVLFDEIEKAHPDVFNVMLQILDDGRLTDSQGRTVDFSNTII
IMTSNIGSQFILDVSGDDSKYEQMRSRVMDAMRANFRPEFLNRIDEIIIFHSLEKSQLRHIVKLQVARLETRLAEQKLSL
SLSESALDFLAEIGYDPVYGARPLKRAVQKYLETAIAKSILKGEFKDGDTIFVDVEDERLSLKRLPDDLLIKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-152 50
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-108 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 6e-103 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 5e-103 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyan10605_1101 YP_007161267.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-116 42
Cyan10605_1101 YP_007161267.1 ATP-dependent chaperone ClpB VFG2084 Protein 8e-108 41