|
Name : Anacy_6058 (Anacy_6058) Accession : YP_007160104.1 Strain : Genome accession: NC_019773 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease, HsdR family Function : - COG functional category : - COG ID : - EC number : - Position : 101187 - 104363 bp Length : 3177 bp Strand : + Note : PFAM: Domain of unknown function (DUF3387); Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; COGs: COG0610 Type I site-specific restriction-mod DNA sequence : ATGAAATCTGCCCTCACCGAAGCCGAAATCGAAGCATACCAACTCCAACTCCTGCAAACCCTGGGATATAGCTACTGCAA CGGCTATGACATCCAACCAGAAGGCAGTAACCAAGAACGGGAAAGCTTCGGTGAAGTAATTTTAAAACATAGACTCCCCC AGTCCATATCCAGAATTAACCCCACCATTCCTTATGATGCCCAATATCAGGCACAACGGGAAATATTTAATATAGCCAGT TCCGACTTACTCAATAACAACGAAATATTTCATAAATACCTCACAGAAGGCATCACCGTTGAATATCAAAAAGACGGCGA AACCAGAGGCCAACCTGTGCAATTAATTGACTGGGAACACCCGGAAAATAACGAATTTGTGGCAGTTAATCAATTTACAG TTATTGAAGATAATCATAACCACCGCCCCGATATTGTCTTATTTATTAACGGCTTACCCCTGGTTGTGATTGAACTAAAA AACGCCGTAGATGAAAAAGCCAATCTCAACGCCGCCTATAACCAACTGCAAACCTATAAACAGAGAATCCCCAGTCTATT TACCTATAATGCCCTATTAGTAATTTCAGATGGACTTTCCGCCCGTGCTGGTTCACTCACCGCTGGTTTTAACCGCTTCT CCACATGGAAAGTACCTCCCTCAGCAGGTGAGGGAAATAGGCAGAATCCAGAAATAAACGAACTAGAAATTTTAACCAAT GGCTTACTCAATCAGCAAACTTTACTAGATTTAATTCGCTATTTTACTGTGTTTGAAAAGTCCAAAACCACAGACTTAAA AACAGATATTGTTAGCATTACCACTGTTAAAAAAATCGCTGCTTATCATCAATATTACGCCGTTAATAAAGCCATTCAAT CTATCATCACCGCCTCATCCCCAGAAGGAAATCATAAAGGCGGTGTTCTTTGGCACACTCAAGGCAGCGGTAAATCTCTC TCAATGGTGTTTCTAGCCGGAAAACTAGTTTTAAACAAAAGCCTCCAGAACCCCACCATTGTCATGTTGACAGACCGCAA TGATTTAGATGATCAACTATTCGATACCTTTGCTGGCTGTCAACAACTCCTTAGACAAGACCCCCAACAAGCAGAAAATC GAGATCAAGTGCGGGAACTGCTCAACACCAACTCAGGCGGTATCATTTTTACCACCGTCCAGAAATTTTCCCCCGCTGAT GGCGAAACTCTTTATCCCCAAATTAGCCCTCGCCCGAATATCATTGTCTTGGCAGATGAAGCCCACCGCAGCCAATACGG GTTCACAGCTACACAAGTTGATATCAAAGACGAAAACGGCAACATCACAGGCAAACGCACCAAATACGGCTTTGCCAAAT ATATCCGTGATGCCCTGCCAAATGCTACTTTTATCGGCTTCACCGGCACACCCGTAGAACAAACAGACAAAAACACCCCC GCCATTTTCGGTGAATATATTGACATCTACGACATCTCCCAAGCCGTCAAAGATGGGGCAACCGTGCCGATTTATTATGA AAGCCGGTTAGTAAAAGTGGATTTAGACGCAGCCGGGAGACAACTCCTAGATGAACTAGACGAAGACCTCAGCTTTGAAG ACCTCAGCACTACTCAAAAAGCCAAAGCTAAACAAACCCAACTAGAAGCAATTGTCGGTTCTACTAAAAGAATAAAACAG ATTGCCCTAGATATTGTCACCCACTTTGAGGCACGGCAACAGGTAAACAAAGGCAAAGCCATGATTGTTACCATGAGCCG CTTAATTGCTGTTAATCTCTATGATGCCATTATTCAACTCCGTCCAGATTGGCACAATGCAGATATAAACTTGGGCAAAA TCAAAGTTGTCATGACCACCTCTGCATCTGATGAAGGTAATTTAGTTAAACATCACACCAGCAAAGGGCAACGGCAAACC CTCGCCCAACGCCTCAAAGACCCGGACAACTCCCTAGAATTAGCCATAGTCTGCGATATGTGGCTGACAGGCTTTGATGC CCCATGTCTGCATACCATGTATATTGACAAACCACTGAAAAGTCATAATTTAATGCAAGCGATCGCCAGAATTAACCGTG TCTATTTTGAAAAAACAGGCGGACTGATTGTAGACTATTTGGGACTGGCTGCTGAACTCAAAAAAGCCCTATCTTTCTAT TCTCAAAGTGGCGGACAAGGCGCATTAACCCTAGATCAAGATGTGGCTGTGGGCATACTCCTAGCCAAACTAGAAATAGT CAAGCAAATCATCTCAGGCTTTGCCTATCAGCATTATTTTCACACTGACACCGGCGAAAAACTCAATATCCTCAAAAATG CCGTTAACTATGTAGCTACACCGACTATCAAAGATAGATTTCTGACCGAAGTTCACGCCCTCTCCCAAGCCCATTCTCTG GCTGTTCCTCATCCCCAAGCGCTCGCCGCATCGGAAACCATCTCCTTTTTCCAAGCCATCCAAGCCAGCCTCAGAAAACT AGAAAGCAGTGGTGATGGTGGTGGACTCAACAACCAAGACATCGAAACCGCCATTCGTCAAGTTGTAGATCAGGCGTTGG TATCCGATGCCGTAATTAACATTTTTGATGAAGCAGGTATAAAAAACCCTGATATTTCTATCATCTCCGCTGAATTTATG GCAGAAGTGCGGGGGATGGAACATCAAAACTTGGCGGTGGAACTGTTGCAAAAATTACTCAAGGATGAAGTGAAAACCCG CAGTCGGACAAATATTGTCCAAAGTCGCAAACTTTCGGAGATGTTGGAAGATGCCCTACGCCGCTATCGTAACCAAGTCA TCAGTGTGACAGATGTTTTAGAAGCACTGCTGGAACTGGCAAAAGATACCAAAGCTGCTGATGCTAGAGGTGAAGAACTA GGATTAGAACCTTTTGAACTGGCTTTTTATGATGCTCTCTCCCAAAACCAAAGCGCCCAGGATATTATGGGTGTTGATAA GCTGCGCGAATTAGCCATCGTTCTAGTTGAGAGAATCCGCCAAAACGCCTCTATTGACTGGAATCTCAAGGAAAGTGTGC GATCGCGCATGAAGATTGCCGTTAAGCGTCTGCTGCGTAAATATGGCTACCCTCCCGACATGGAAGCCCTAGCGATGGAA CTGGTCTTAGAACAAGCCAAAGTTTTTACTGAATTTGAAGTTTCCACACAACAATGA Protein sequence : MKSALTEAEIEAYQLQLLQTLGYSYCNGYDIQPEGSNQERESFGEVILKHRLPQSISRINPTIPYDAQYQAQREIFNIAS SDLLNNNEIFHKYLTEGITVEYQKDGETRGQPVQLIDWEHPENNEFVAVNQFTVIEDNHNHRPDIVLFINGLPLVVIELK NAVDEKANLNAAYNQLQTYKQRIPSLFTYNALLVISDGLSARAGSLTAGFNRFSTWKVPPSAGEGNRQNPEINELEILTN GLLNQQTLLDLIRYFTVFEKSKTTDLKTDIVSITTVKKIAAYHQYYAVNKAIQSIITASSPEGNHKGGVLWHTQGSGKSL SMVFLAGKLVLNKSLQNPTIVMLTDRNDLDDQLFDTFAGCQQLLRQDPQQAENRDQVRELLNTNSGGIIFTTVQKFSPAD GETLYPQISPRPNIIVLADEAHRSQYGFTATQVDIKDENGNITGKRTKYGFAKYIRDALPNATFIGFTGTPVEQTDKNTP AIFGEYIDIYDISQAVKDGATVPIYYESRLVKVDLDAAGRQLLDELDEDLSFEDLSTTQKAKAKQTQLEAIVGSTKRIKQ IALDIVTHFEARQQVNKGKAMIVTMSRLIAVNLYDAIIQLRPDWHNADINLGKIKVVMTTSASDEGNLVKHHTSKGQRQT LAQRLKDPDNSLELAIVCDMWLTGFDAPCLHTMYIDKPLKSHNLMQAIARINRVYFEKTGGLIVDYLGLAAELKKALSFY SQSGGQGALTLDQDVAVGILLAKLEIVKQIISGFAYQHYFHTDTGEKLNILKNAVNYVATPTIKDRFLTEVHALSQAHSL AVPHPQALAASETISFFQAIQASLRKLESSGDGGGLNNQDIETAIRQVVDQALVSDAVINIFDEAGIKNPDISIISAEFM AEVRGMEHQNLAVELLQKLLKDEVKTRSRTNIVQSRKLSEMLEDALRRYRNQVISVTDVLEALLELAKDTKAADARGEEL GLEPFELAFYDALSQNQSAQDIMGVDKLRELAIVLVERIRQNASIDWNLKESVRSRMKIAVKRLLRKYGYPPDMEALAME LVLEQAKVFTEFEVSTQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 46 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 46 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 46 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 45 |
