Gene Information

Name : Anacy_4949 (Anacy_4949)
Accession : YP_007159199.1
Strain : Anabaena cylindrica PCC 7122
Genome accession: NC_019771
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5598787 - 5599479 bp
Length : 693 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: naz:Aazo_2453

DNA sequence : 
ATGAGAATTTTATTAGTTGATGATGAATTTGAACTCACAGATCCCTTAAGCCGCATCTTAACTCGTGAAGGTTATATTGT
AGATACTGCTTATAATGGAACAAGCGGCAGCCAACTTGCACAAACAGGCACTTATGACTTACTAATTTTAGATTGGATGT
TGCCAGGAAAAACAGGGTTGGAAATTTGTCAGGAATTACGCCGACAAGCTAAAACTACCCCCGTTCTATTTCTAACAGCC
AAAGATACTCTAGATGACCGTGTACAAGGTTTAGATGCTGGTGCAGATGATTATTTAGTGAAACCCTTTGAACTGCGGGA
GTTACTAGCAAGAGTCCGTGCTTTGTTGCGGCGTTCAGGCGTTGAGTTGCATAGCACTTCATCACTACGTTTAGTAGTAG
CTGATTTAGAACTAGATGTAGAAAACCAAATATCTTATCGTCAAGGCCGAATTATTGAGCTATCCCAAAAAGAAAGTCAG
CTACTACAATATTTTATGGAACACGCTGGACAATTGCTGACTCACGGGCAGATTATGCAACATTTATGGCAAGATGATGA
ACAACCAGGAAGTAATGTCATCGCTGCATTAATTCGCTTGTTGCGGCGTAAAATTGAAGTAAATAGTGAATCTGCACTCA
TTCATACAGTTTACGGCAAAGGCTATCGTTTTGGCTCTGTCGTAATGGAATAA

Protein sequence : 
MRILLVDDEFELTDPLSRILTREGYIVDTAYNGTSGSQLAQTGTYDLLILDWMLPGKTGLEICQELRRQAKTTPVLFLTA
KDTLDDRVQGLDAGADDYLVKPFELRELLARVRALLRRSGVELHSTSSLRLVVADLELDVENQISYRQGRIIELSQKESQ
LLQYFMEHAGQLLTHGQIMQHLWQDDEQPGSNVIAALIRLLRRKIEVNSESALIHTVYGKGYRFGSVVME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Anacy_4949 YP_007159199.1 two component transcriptional regulator, winged helix family BAC0197 Protein 1e-31 47
Anacy_4949 YP_007159199.1 two component transcriptional regulator, winged helix family BAC0111 Protein 7e-31 44
Anacy_4949 YP_007159199.1 two component transcriptional regulator, winged helix family BAC0288 Protein 1e-33 43
Anacy_4949 YP_007159199.1 two component transcriptional regulator, winged helix family BAC0125 Protein 1e-30 43
Anacy_4949 YP_007159199.1 two component transcriptional regulator, winged helix family BAC0308 Protein 2e-26 43
Anacy_4949 YP_007159199.1 two component transcriptional regulator, winged helix family BAC0347 Protein 3e-28 41
Anacy_4949 YP_007159199.1 two component transcriptional regulator, winged helix family HE999704.1.gene1528. Protein 9e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Anacy_4949 YP_007159199.1 two component transcriptional regulator, winged helix family VFG1390 Protein 7e-30 42
Anacy_4949 YP_007159199.1 two component transcriptional regulator, winged helix family VFG0596 Protein 4e-28 41
Anacy_4949 YP_007159199.1 two component transcriptional regulator, winged helix family VFG1386 Protein 1e-28 41