Gene Information

Name : clpE (EFS1_0553)
Accession : YP_007152345.1
Strain : Enterococcus faecalis Symbioflor 1
Genome accession: NC_019770
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP-binding subunit ClpE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 556746 - 558986 bp
Length : 2241 bp
Strand : -
Note : -

DNA sequence :
ATGATTTGTCAAAATTGTCAACAAAATGAAGCAACAATTCATTTATATGCAAATGTGAATGGTCAAAGAAAACAACTGGA
CTATTGCCAAAGCTGCTATCAAAAATTAAAAAATCAAGCAAATAATTCCCCTCAAAATATGGGACAAGACCCTTTTGGCT
TTGGGAGTTTAGACGATTTATATCGTTCTCTTTCTCGCCAAATGCAACAAGGTAATCCTTATGAACAACAAACACCACCC
ACTCAATTTGGTGATGGTGGTAATGGAGGTCAACCCCCTCGCGGAGGCGCTGGCGCTGGTCAAGGTTTACTAGGCGAGTA
TGGGATTAACATCACCGAAGCGGCACGCCAAGGAGATATCGATCCTGTGGTAGGACGTGACCAAGAAATTAAGCGTGTCA
TTGAAATCTTAAATCGCCGTACAAAAAACAACCCCGTTTTAATCGGTGAACCAGGTGTTGGTAAAACAGCCGTTGTCGAA
GGTTTAGCCCAAAAAATTGTCGATGGCGATGTGCCCCAAAAATTATTGGACAAAGAAGTCATTCGTTTAGATGTGGTTTC
ACTTGTTCAAGGAACTGGTATTCGCGGACAATTTGAAGAACGGATGCAAAAATTGATTGAAGAAATCACTGAAGCTGAAA
ATGTCATTTTATTTATTGATGAAGTCCATGAAATTGTGGGTGCTGGTGCTGCTGGTGATGGCAACATGGATGCTGGCAAT
ATTTTAAAACCAGCCTTAGCACGTGGTGAATTACAATTAGTCGGTGCCACAACTTTAAATGAGTACCGTATTATTGAAAA
AGATGCTGCCTTAGAACGTCGGATGCAACCAGTCCAAGTAGATGAGCCAACCGTTGCCGAAACCATAACGATTTTACATG
GTTTGCAAAAACGTTATGAAGATTATCATCATGTTAAATATACAGATGAAGCGATTAACGCAGCAGCAAACTTATCCAAT
CGTTACATTCAAGATCGCTTTTTACCAGATAAAGCGATTGACTTGTTAGATGAATCTGGTTCAAAAATGAATCTAACTAT
CCAACTCGTCGATCCAAAAACAATTGATAAAAAATTAGCAGAAGCGGAACAACAAAAACAACAAGCTTCCGCAGAAGAAG
ATTTTGAAAAAGCGGCTTATTATCGTGATCAAATCAATAAATTACAAGCAATGAAAGAAAAACAAATCAGCGATGAAGAA
ACACCCGTCATCACTGAAAAAGATATTGAAGCCATTGTGGAACAAAAAACTGGCATTCCTGTCGGTGACTTAAAAGAAAA
AGAACAAACCCAATTGAAAAATTTAGCTGTTGACTTAAAAGCTCATGTTGTCGGACAAGATGATGCCGTCGATAAAGTAG
CTAAAGCGATTCGTCGCAATCGTGTAGGCCTAGGCAAACAAAACCGCCCAATTGGTTCCTTCTTATTTGTAGGGCCAACA
GGCGTTGGTAAAACAGAATTAGCAAAACAATTAGCTTTTGAGCTATTCGGTTCAGAAGATTCGATGGTTCGTTTTGATAT
GAGTGAGTATATGGAAAAACACAGTGTTTCTAAACTGATTGGTTCTCCTCCAGGCTATGTTGGGTATGACGAAGCTGGAC
AACTCACAGAAAAAGTCCGTCGTAATCCTTATAGTTTAATTTTATTGGATGAAATTGAAAAAGCGCATCCTGATGTTTTA
CACATGTTTTTACAAATTCTCGACGATGGTCGTTTAACAGATGCACAAGGTCGTACAGTCAGCTTTAAAGACACCATCAT
TATCATGACAAGTAATGCTGGAACAGGAGCTGTGGAAGCCAACGTTGGCTTCGGTGCTGCCCGTGAAGGTGTGACTAAAT
CCGTTTTAGGTCAATTGAACAACTTCTTCACCCCCGAATTCCTTAACCGTTTCGATGGTATTATCGAATTCAAAGCATTA
AGCAAAGAAAACCTGATGAACATTGTTAGCTTGATGTTAGAAGAAGTAAATGGCTTATTAGCTAAACAAAAATTACACAT
TGAGGTTCCAACAGAAGTCAAAGAGAAACTCGTTGATTTAGGTTATGATCCTGCAATGGGCGCTCGTCCTTTACGTCGAA
CAATTCAAGAACAAATTGAAGACGGCATTGCTGAATACTATCTAGATCATCCTGAAAATCATCAATTAGTCGCAGCGTTA
GATAACGAAGGTAAAATTATCGTAACTGGCGCACAAGAAGTGACTAAAACAGAAACTTCAACATCTGACCAAGCAGAATA
A

Protein sequence :
MICQNCQQNEATIHLYANVNGQRKQLDYCQSCYQKLKNQANNSPQNMGQDPFGFGSLDDLYRSLSRQMQQGNPYEQQTPP
TQFGDGGNGGQPPRGGAGAGQGLLGEYGINITEAARQGDIDPVVGRDQEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVE
GLAQKIVDGDVPQKLLDKEVIRLDVVSLVQGTGIRGQFEERMQKLIEEITEAENVILFIDEVHEIVGAGAAGDGNMDAGN
ILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVQVDEPTVAETITILHGLQKRYEDYHHVKYTDEAINAAANLSN
RYIQDRFLPDKAIDLLDESGSKMNLTIQLVDPKTIDKKLAEAEQQKQQASAEEDFEKAAYYRDQINKLQAMKEKQISDEE
TPVITEKDIEAIVEQKTGIPVGDLKEKEQTQLKNLAVDLKAHVVGQDDAVDKVAKAIRRNRVGLGKQNRPIGSFLFVGPT
GVGKTELAKQLAFELFGSEDSMVRFDMSEYMEKHSVSKLIGSPPGYVGYDEAGQLTEKVRRNPYSLILLDEIEKAHPDVL
HMFLQILDDGRLTDAQGRTVSFKDTIIIMTSNAGTGAVEANVGFGAAREGVTKSVLGQLNNFFTPEFLNRFDGIIEFKAL
SKENLMNIVSLMLEEVNGLLAKQKLHIEVPTEVKEKLVDLGYDPAMGARPLRRTIQEQIEDGIAEYYLDHPENHQLVAAL
DNEGKIIVTGAQEVTKTETSTSDQAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-144 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE YP_007152345.1 ATP-dependent Clp protease, ATP-binding subunit ClpE VFG0080 Protein 0.0 61
clpE YP_007152345.1 ATP-dependent Clp protease, ATP-binding subunit ClpE VFG0079 Protein 4e-149 53