Gene Information

Name : Cylst_0715 (Cylst_0715)
Accession : YP_007145723.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Virulence
Product : L-glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 809875 - 811290 bp
Length : 1416 bp
Strand : -
Note : PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I

DNA sequence :
ATGACAACCCCCAAAGAAGTCTTAAAGTTGATTCAAGACCAAAAAATTCAGATGATTGATCTGAAATTCATCGATACACC
GGGGACATGGCAGCATCTCACCGTGTTTCACGACCAAATCGATGAAAGTTCATTCTCTGATGGCGTACCCTTCGACGGTT
CGAGTATTCGGGGTTGGAAAGGCATTGAAGAATCAGACATGACGATGGTACTTGATCCAAACACCGCTTGGATCGACCCG
TTCATGAAAGAGCCAACGCTAAGTATAATTTGTAGCATCAAAGAACCCCGCACGGGTGAATGGTACAACCGTTGCCCGCG
CGTTATTGCCCAAAAAGCAATAGATTACCTAGCTTCCACTGGACTTGGTGACACAGCCTTCTTTGGCCCAGAAGCCGAAT
TCTTCATTTTTGATGATGTCCGCTACGACCAAACTGCCAACGAAGGCTACTACCACGTAGATTCTGTAGAAGGTCGTTGG
AACACAGGCAGAAAGGAAAGCCCCAACCTCGGTTACAAAACACGCTTCAAAGAAGGTTACTTCCCAGTTCCACCAACGGA
TACCTTCCAAGATATCCGGACAGAAATGCTACTGACAATGGCAGCCTGCGGCGTACCCATTGAAAAGCAACACCACGAAG
TTGCTACCGGTGGTCAGTGCGAACTGGGTTTCAAGTTTGGTAAGTTGATCCAAGCTGCTGACTGGTTGATGACATACAAA
TATGTGATCAAGAACGTGGCTAGGAAATACGGTAAAACCGTCACCTTCATGCCAAAACCAATTTTTGGCGATAACGGTTC
CGGTATGCACTGTCACCAGTCGATCTGGAAAGATGGTAAACCCTTGTTTGCAGGTGATAAGTATGCTGGGATGAGTGAAA
TGGGACTGTACTACATTGGTGGTATTCTCAAGCACGCACCAGCACTCTTGGCAATCACCAATCCCACCACCAACTCCTAC
AAGCGCCTAGTACCTGGTTATGAAGCACCTGTAAACTTGGCTTACTCCCAAGGTAATCGTTCTGCTTCTGTGCGGATTCC
TCTGTCTGGCGATAACCCTAAAGCCAAGCGATTAGAGTTCCGTTGTCCAGATGCTACTTCTAACCCCTACTTGGCCTTTG
CTGCCATGCTTTGTGCTGGTCTTGATGGTATTAAGAACAAAATCCATCCCGGTGAACCCTTAGATAAAAATATCTATGAA
CTCTCTCCAGAAGAACTGGCGAAGGTTCCTTCCACTCCTGGTTCTCTAGAACTGGCATTGGAAGCACTGGAAAACGACCA
CGCTTTCTTGACAGATACAGGTGTCTTTTCTGAAGACTTCATCCAAAACTGGATTGACTACAAGCTAGTTAACGAAGTTA
AGCAGATGCAGTTGCGTCCTCATCCTTATGAATTCTTCCTCTATTACGATTGCTAA

Protein sequence :
MTTPKEVLKLIQDQKIQMIDLKFIDTPGTWQHLTVFHDQIDESSFSDGVPFDGSSIRGWKGIEESDMTMVLDPNTAWIDP
FMKEPTLSIICSIKEPRTGEWYNRCPRVIAQKAIDYLASTGLGDTAFFGPEAEFFIFDDVRYDQTANEGYYHVDSVEGRW
NTGRKESPNLGYKTRFKEGYFPVPPTDTFQDIRTEMLLTMAACGVPIEKQHHEVATGGQCELGFKFGKLIQAADWLMTYK
YVIKNVARKYGKTVTFMPKPIFGDNGSGMHCHQSIWKDGKPLFAGDKYAGMSEMGLYYIGGILKHAPALLAITNPTTNSY
KRLVPGYEAPVNLAYSQGNRSASVRIPLSGDNPKAKRLEFRCPDATSNPYLAFAAMLCAGLDGIKNKIHPGEPLDKNIYE
LSPEELAKVPSTPGSLELALEALENDHAFLTDTGVFSEDFIQNWIDYKLVNEVKQMQLRPHPYEFFLYYDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-101 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cylst_0715 YP_007145723.1 L-glutamine synthetase VFG1399 Protein 2e-133 58