|
Name : Cylst_5650 (Cylst_5650) Accession : YP_007150330.1 Strain : Cylindrospermum stagnale PCC 7417 Genome accession: NC_019757 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 6345532 - 6348177 bp Length : 2646 bp Strand : + Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB DNA sequence : ATGCAGCCTACAGATCCCAATAAATTTACTGATACAGCCTGGGAAGCGATTGTCAAATCCCAGGATATAGTCCGTGCTTA TAAACAACAGCAACTAGATGTTGAACATTTAATCATTGCCCTATTAGAAGAACCCAGCAGTCTGGCAACAGGTATCCTCG CACGGGCTGAAGTTGACCCGCTGCGTTTGCAACAGCAACTAGAAGCTTATACCCAACGCCAGCCAAAAGTCGCCAAAAGC GATCAGCTATATCTGGGCACGAGTTTAGACACATTGCTCGACCGAGCCGAGGCAAATCGCGCTAAATTCAAAGATGCTGA TATCTCCGAGGGTCATATACTCCTGGCCTTTGCTGAAGATGAACGCATTGGTAGAAGGGTGCTGAAAGGCTTTAACGTGG ACATTGCCAAACTAGAAGCGGCTGTGAAAACTGTCCGCACTAGCAGTCCAAAGGTGATGGAACAAAGTCCAGAATCCCGC TTTGCAGCTTTAGAAAAATTTGGCAGGGACTTGACAGAACAGGCAAAAGCGGGAAAATTAGACCCGGTGATTGGGCGAGA TGACGAAATTCGCCGGGTAATTCAGGTATTATCTCGCCGCAGCAAGAATAATCCGGTGTTGATTGGTGAACCGGGGGTGG GGAAAACTGCGATCGCCGAAGCATTAGCACAGAGAATGGTAAATGGGGATGTTCCTGAATCTCTCAAGAACCGCCAATTA ATCTCTTTAGATATCGGTAGCTTAATCGCTGGGGCTAAATATCGCGGTGAATTTGAAGACCGCCTCAAAAATGTTCTCCG GGAAGTTATAGAATCAAACGGGCAAATTGTCCTGTTTATTGACGAACTACACACCGTTGTCGGCACCGGTTCCAATCAAC AAGGGGCGATGGATGCCGGGAATTTGCTCAAACCGATGTTGGCACGGGGAGAACTGCGTTGTATCGGTGCCACTACCCTA GATGAATACCGCAAATACATTGAAAAAGACGCCGCCCTCGAACGCCGCTTTCAACAAGTATATGTAGACCAGCCCAGCGT GGAAAACACAATTTCCATCCTCCGGGGGTTGAAAGAACGCTATGAAGTGCATCACAACGTCAAAATTTCTGATTTGGCTT TGGTAGCCGCCGCAACGCTTTCAGCCCGGTACATTTCTGACCGCTTTTTGCCAGATAAAGCGATTGATTTGGTGGATGAG GCAGCGGCAAAGTTGAAAATGGAGATTACCTCCAAACCAGCGGAATTAGAAACTATTGACCGTCGGCTGATGCAGCTAGA AATGGAAAAGCTGTCTTTAGCTGGTGAAGAAAAGGGAATTGCTCAAACTAGAGAGCGTTTGGAGCGAATTGAGCTAGAAA TCGCCACTTTAACGATCAAACAGCAGAAATTTAATGACCAATGGCAAGGCGAAAAGCAGCTATTGGAGGCTATCAGTGTT TTGAAGAAAGAAGAAGATGCCCTGCGGGTGCAAATTGAGCAGGCAGAACGGGATTATGATTTGAATAAAGCTGCTCAACT TAAGTATGGCAAATTGGAAGGAGTGCAGCACGATCGCGAAATTAAAGAAACCCAACTTTTAGAAATTCAAAACCAAGGTT CTACTTTGCTGCGAGAACAAGTCACCGAAGCCGATATTGCCGAAATCGTCGCCAAGTGGACAGGCATCCCCGTCAATCGC TTATTGGAATCGGAACGGCAAAAGTTACTTCAACTAGAAAGCCATTTGCATCAACGAGTGATTGGGCAAGAAGAAGCTGT AGCTGCCGTCTCCGCTGCCATTCGTCGCGCCCGTGCGGGGATGAAAGACCCTGGTCGTCCCATTGGTTCATTTTTGTTCA TGGGACCCACTGGTGTAGGTAAAACTGAACTCGCCCGCGCTTTAGCTCAGTTTCTCTTTGATTCTGATGACGCCTTGGTG CGTTTGGATATGTCTGAGTATATGGAAAAACACTCAGTTTCTCGCCTCGTGGGAGCGCCTCCGGGATACATTGGTTACGA AGAAGGTGGGCAACTTTCTGAGACGGTTCGCCGGCATCCCTATTCGGTGGTGCTGTTGGATGAGGTGGAGAAGGCCCACC CCGATGTGTTTAATATTTTGTTGCAGGTGCTGGATGATGGGAGAATTACGGACTCTCAGGGGCGAACAGTCGATTTTCGC AATACTGTGATTGTGATGACGAGTAACATCGGCAGTGAATACATTCTCGATGTTTCTGGTGATGATACCAAGTATGACAC AATGCGGAATCGGGTCACAGAGGCTTTGCGATCGCACTTTCGCCCCGAATTTCTCAACCGCGTCGATGACATTATCCTCT TCCACACCCTCAACCGCAAAGAAATGCGTCACATCATCCGCATTCAACTCCAGCGGGTAGAAAATCTGCTCAAAGAGCAA AAAATCTCCTTTGATATCTCTCCAGCGGCTTGTGATTACCTTGTAGAAGCAGGCTATGACCCAGTTTACGGCGCTCGTCC TCTGAAAAGAGCAATTCAGAGAGAAGTCGAAAATGCGATCGCCACCAAGTTATTAGAAAATACTTTTATCTCTGGAGACA CGATTTTTATCGAAAAAGGTGAAACAGGTTTAACCTTCAGCAAAAAAGCACCTGTGAAGGTAACAGTAGTCCAAACTGCT ACTTAG Protein sequence : MQPTDPNKFTDTAWEAIVKSQDIVRAYKQQQLDVEHLIIALLEEPSSLATGILARAEVDPLRLQQQLEAYTQRQPKVAKS DQLYLGTSLDTLLDRAEANRAKFKDADISEGHILLAFAEDERIGRRVLKGFNVDIAKLEAAVKTVRTSSPKVMEQSPESR FAALEKFGRDLTEQAKAGKLDPVIGRDDEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEALAQRMVNGDVPESLKNRQL ISLDIGSLIAGAKYRGEFEDRLKNVLREVIESNGQIVLFIDELHTVVGTGSNQQGAMDAGNLLKPMLARGELRCIGATTL DEYRKYIEKDAALERRFQQVYVDQPSVENTISILRGLKERYEVHHNVKISDLALVAAATLSARYISDRFLPDKAIDLVDE AAAKLKMEITSKPAELETIDRRLMQLEMEKLSLAGEEKGIAQTRERLERIELEIATLTIKQQKFNDQWQGEKQLLEAISV LKKEEDALRVQIEQAERDYDLNKAAQLKYGKLEGVQHDREIKETQLLEIQNQGSTLLREQVTEADIAEIVAKWTGIPVNR LLESERQKLLQLESHLHQRVIGQEEAVAAVSAAIRRARAGMKDPGRPIGSFLFMGPTGVGKTELARALAQFLFDSDDALV RLDMSEYMEKHSVSRLVGAPPGYIGYEEGGQLSETVRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFR NTVIVMTSNIGSEYILDVSGDDTKYDTMRNRVTEALRSHFRPEFLNRVDDIILFHTLNRKEMRHIIRIQLQRVENLLKEQ KISFDISPAACDYLVEAGYDPVYGARPLKRAIQREVENAIATKLLENTFISGDTIFIEKGETGLTFSKKAPVKVTVVQTA T |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 9e-102 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cylst_5650 | YP_007150330.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 6e-113 | 43 |
