Gene Information

Name : Cylst_5367 (Cylst_5367)
Accession : YP_007150070.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6061368 - 6061835 bp
Length : 468 bp
Strand : -
Note : PFAM: SmpB protein; TIGRFAM: SsrA-binding protein

DNA sequence :
ATGAGCGATCAGAACGACGGTTACAAAGTTATTAGCGACAATCGACAAGCTCGTTATCTGTACGAAATCCTCGAGACCTA
CGAAGCTGGAATTCAGTTGACAGGAACCGAGGTGAAGTCGATCCGCGAGGGTAAAGTCAATCTCCAAGATGGCTATGCCT
TAATTCGCGATGGCCAAGCATGGTTAATCAATATGCATATCTCGCCTTACAACGCCAGTGGACAATATTTTAATCATGAA
CCGCGCCGCACGCGCAAGCTGCTGCTACATCGCCAGGAGATCCGCAAGCTAATTGGTAAGGTGGAACAGCAAGGTTTAAC
ATTAGTCCCTTTGAAAATGTATCTCAAACGAGGCTGGGTGAAAGTGAGTATCGCCCTTGGTAAAGGTAAAAAGCTCCACG
ACAAACGCGAAGACCTGAAACGACGCCAAGATCAGCGCGATATTCAACGGGCAATGAAAAATTATTAA

Protein sequence :
MSDQNDGYKVISDNRQARYLYEILETYEAGIQLTGTEVKSIREGKVNLQDGYALIRDGQAWLINMHISPYNASGQYFNHE
PRRTRKLLLHRQEIRKLIGKVEQQGLTLVPLKMYLKRGWVKVSIALGKGKKLHDKREDLKRRQDQRDIQRAMKNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-30 50
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-33 50
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 1e-29 44