Gene Information

Name : Cylst_4896 (Cylst_4896)
Accession : YP_007149628.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Unknown
Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.26
Position : 5546812 - 5548020 bp
Length : 1209 bp
Strand : +
Note : PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD

DNA sequence :
ATGGATAATTCCCCAGTGGTCGCTCAAGCAGATGCATCCTCACCCAATGACACTCAGGAAAATGCACTACTAGTGGGGAC
GGCAGTTAGCTCAGATTCACCAAAGAAAGTAAGGGTAGGCAGTGACAATGACCGCCAAATGATGCAGCGGTGTTTGGAAT
TAGCCCGCCGCGCTTTAGGACGTACTTCGCCAAATCCCCTAGTGGGGGCGGTGATTGTCAAAGATGGGGAAATTGTCGGT
GAAGGGTTTCATCCCCGTGCAGGTGAACCCCATGCGGAAGTTTTTGCTTTGAGAGCAGCAGGCAATCGCGCTCATGGAGC
TACAATCTATGTCAGCCTCGAACCTTGCAATCACTATGGACGCACTCCCCCTTGTTCTGAAGCTTTAATAGACGCTGGGG
TGGCAAAGGTGGTGGTGGGTATGGTTGACCCTAACCCACTAGTCGCTGGCGGTGGTATTGACCGTTTACGTAGGGCGGGA
ATAGAAGTTTTGGTAGGAGTGGAAGAAGCAGCTTGTCATCAGCTAAATGAAGCTTTTGTTCATCGCATTCTCTACAAACG
ACCTATGGGCATTTTGAAATATGCCATGACTTTAGATGGCAAAATTGCTACGAGTTTTGGTCACAGTGCTTGGGTAACCA
GCCAAGAGGCCCGGAGCGAAGTACATCAACTGCGGTTAAGTTGTGATGCTGTAATTGTCGGTGGTAATACAGTCCGACAA
GACAATCCTCACTTAACCAGTCATCAACCGGGGGGGCATAATCCCTTGCGGGTGGTGATGAGTCGCCGTCTAAACTTGCC
AGAAAATGCCCGCCTGTGGCAAACAGCCGAAGCTCCGACTTTGGTGTTGACGGAGGTAGGCGCTAATCCTAATTTCCAAG
ATTTGTTGCGGAAACTTGGGGTGGAGGTAGTGGAATTGCCATTGCTGACACCAGATCAGGCAATGACCTATTTATATAAG
CGAGGTTTTTGTAGCGTGTTGTGGGAGTGTGGTGGTACTTTAGCTGCAAGTGCGATCGCTCAAGGCGCAGTGCAAAAAGT
CCTGGCTTTTATTGCCCCAAAAATCATTGGTGGTAGTAATGCTCCTACACCTGTGGGCGATTTAGGTTTCACTACCATGA
CTGAGGCATTATCCCTAGAACGTGTACGTTGGCGAGTGATCGGTGTCGATTGCTTAGTGGAAGGTTATTTGCGCCAAAAA
AGTCAATAG

Protein sequence :
MDNSPVVAQADASSPNDTQENALLVGTAVSSDSPKKVRVGSDNDRQMMQRCLELARRALGRTSPNPLVGAVIVKDGEIVG
EGFHPRAGEPHAEVFALRAAGNRAHGATIYVSLEPCNHYGRTPPCSEALIDAGVAKVVVGMVDPNPLVAGGGIDRLRRAG
IEVLVGVEEAACHQLNEAFVHRILYKRPMGILKYAMTLDGKIATSFGHSAWVTSQEARSEVHQLRLSCDAVIVGGNTVRQ
DNPHLTSHQPGGHNPLRVVMSRRLNLPENARLWQTAEAPTLVLTEVGANPNFQDLLRKLGVEVVELPLLTPDQAMTYLYK
RGFCSVLWECGGTLAASAIAQGAVQKVLAFIAPKIIGGSNAPTPVGDLGFTTMTEALSLERVRWRVIGVDCLVEGYLRQK
SQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-49 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-49 43