Gene Information

Name : Cylst_4729 (Cylst_4729)
Accession : YP_007149473.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Virulence
Product : urease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5369917 - 5371668 bp
Length : 1752 bp
Strand : -
Note : PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit

DNA sequence :
ATGAGTTATCGGATGAATCGACGGAACTATGCAGCCATGTTTGGCCCTACCGTTGGCGATCGCGTTCGACTTGCAGATAC
AGAGTTATTTATTGAAGTAGAACAAGACTTCACCACCTATGGCGAAGAAGTTAAATTCGGTGGCGGTAAGGTGATTCGGG
ATGGGATGGGACAGTCTCCCTTAATCAATGGCACCGATATCTTAGGGAATTCTCCCAAGATTGGCGATGGTGTCAACCAA
GCCGTAGATGTAGTCATTACCAACGCCTTGATTCTTGATTGGTGGGGCATCGTCAAAGCCGATATTGGCATTAGAAACGG
CAAAATATTCAAAATTGGCAAAGCCGGCAATCCCTACACCCAAGACGGCGTAGATATCATCATTGGCCCAGGCACCGAAG
TGATAGCGGGAGAAGGCAGAATTGTCACAGCCGGGGCCATTGATACCCACATTCACTTTATTTGTCCCCAGCAAATCGAA
ACTGCGATCGCCTCTGGAACTACAACCATGCTTGGCGGCGGTACAGGCCCAGCCGCTGGAACTACCGCCACCACTTGCAC
CCCTGGCCCTTGGAACATTCACCGGATGTTACAAGCAGCCGACGCCTTCCCCATCAACATCGGGTTTTTTGGCAAAGGCA
ATACCAGCAAACCCGAAGCCTTAATCGAACAAATTGAAGCTGGTGCTATGGGTTTAAAGCTACACGAAGATTGGGGATCT
ACTCCAGCTGCGATTGATAACTGCCTGAGTGTGGCCGAGGATTATGACGTACAAGTGGCGATTCACACCGACACCCTCAA
CGAAGCGGGGTTTGTCGAAGACACCATTAAAGCTTTTAAAGAACGAGTGATTCACACCTTCCATACCGAAGGCGCTGGCG
GCGGTCATGCCCCTGATATACTCAGAGTCTGTAGCTATAATTACGTTCTACCAGCTTCGACGAATCCCACCCGTCCCTAC
ACCATTAACACTCTGGCAGAACACAAAGATATGTTGATGGTGTGCCATCACCTCGACCCGAACATTGAGGAAGATGTCAA
ATTTGCCGATTCGAGAATACGCCCCCAAACAATTGCCGCTGAAGATATATTGCAGGATATGGGCGTGATTAGCATCATGT
CTTCTGATTCCCAGGCCATGGGCAGAGTCGGGGAAGTGATTATTCGCACTTGGCAAACCGCCCATAAGATGAAAGTCCAA
AGAGGCCCCCTTAATTCTGATGGTGCAAATAACGACAACTTGAGAGCCAAGCGCTACATCGCTAAATACACCATTAACCC
AGCGATCGCTCATGGAATTGCCAACCATGTCGGTTCTGTCGAAGTCGGGAAGTTAGCCGATTTGTGTTTGTGGAAACCAG
CCTTTTTTGGAGTCAAGCCAGAGCTTGTGATTAAGGGAGGAATGATCGCTTGGGGACAAATGGGCGATCCCAACGCCAGT
ATTTCCACCCCCGAACCCGTTCACATGCGTCCGATGTTTGGCTCTTTTGGCGGGGCAATTGGGGCAAATTCAATTACTTT
TGTTTCCCAAGAAGCTTTGAATAGAGAAGTGCCTAAACATCTTGGCTTAACTACTCGCACAGAGGCAGTTGCTAATACAC
GCAGTATCAGGAAAGCAGATATGAAACATAATGACGCTACCCCCCTAATTGAAGTCGATGCCGAGACTTATGAAGTCAGG
GTGGAAGGAAAATTGATCACCTGTGAACCTGCTAGCTATTTGCCCATGGCCCAGCGTTATTTCTTGTTTTAA

Protein sequence :
MSYRMNRRNYAAMFGPTVGDRVRLADTELFIEVEQDFTTYGEEVKFGGGKVIRDGMGQSPLINGTDILGNSPKIGDGVNQ
AVDVVITNALILDWWGIVKADIGIRNGKIFKIGKAGNPYTQDGVDIIIGPGTEVIAGEGRIVTAGAIDTHIHFICPQQIE
TAIASGTTTMLGGGTGPAAGTTATTCTPGPWNIHRMLQAADAFPINIGFFGKGNTSKPEALIEQIEAGAMGLKLHEDWGS
TPAAIDNCLSVAEDYDVQVAIHTDTLNEAGFVEDTIKAFKERVIHTFHTEGAGGGHAPDILRVCSYNYVLPASTNPTRPY
TINTLAEHKDMLMVCHHLDPNIEEDVKFADSRIRPQTIAAEDILQDMGVISIMSSDSQAMGRVGEVIIRTWQTAHKMKVQ
RGPLNSDGANNDNLRAKRYIAKYTINPAIAHGIANHVGSVEVGKLADLCLWKPAFFGVKPELVIKGGMIAWGQMGDPNAS
ISTPEPVHMRPMFGSFGGAIGANSITFVSQEALNREVPKHLGLTTRTEAVANTRSIRKADMKHNDATPLIEVDAETYEVR
VEGKLITCEPASYLPMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 3e-174 65
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 3e-174 65
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-167 62
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-168 62
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-168 62
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-168 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cylst_4729 YP_007149473.1 urease VFG0270 Protein 4e-150 61