Gene Information

Name : Cylst_3420 (Cylst_3420)
Accession : YP_007148250.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3899109 - 3899780 bp
Length : 672 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGGCAACGATGATTTGGATGGAATCCATTACCAAAACCTACCATTTAGGAGAAGTTGATGTTCCTATACTCAAGGGAAT
TCAACTCTCAATTGAAGAGGGTGAATATGTCTCCATTATGGGTGCGTCAGGTTCTGGCAAATCTACGCTGATGAATATTT
TGGGCTGTCTGGATCGTCCCACTACTGGAAACTATATTTTGGAAGGCAGAAATCTCACAACTTTTGATGATGATGAATTA
GCGTATATTCGCAACCAAAGGATCGGTTTTGTTTTCCAACAATTTAACTTATTGGCACGGGCAACGGCACTAGAAAATGT
GATGTTACCGATGATTTACGCTAATTTACCTAAGCCAAAACGCCGTGAAAGGGCATTGTCGGCTTTGCAAAAGGTGGGAT
TAGGCGATCGCATTTCTAACCGCCCTAGTCAACTCTCTGGGGGTCAACAACAACGGGTGGCGATCGCCCGCGCTTTGGTC
AATCGACCTGCATTAGTTTTGGCAGATGAACCCACGGGAGCTTTAGACACTGAGACTTCTTACGAGGTGATGAGTTTGCT
CTCAGAACTTAATCAGCAAGGAATCACCATCGTGATTGTGACTCATGAACCAGATATCGCTGCCCAAACTCAAAGAATTA
TCCGTGTCCAAGATGGTTTGATTGTGCGCTAA

Protein sequence :
MATMIWMESITKTYHLGEVDVPILKGIQLSIEEGEYVSIMGASGSGKSTLMNILGCLDRPTTGNYILEGRNLTTFDDDEL
AYIRNQRIGFVFQQFNLLARATALENVMLPMIYANLPKPKRRERALSALQKVGLGDRISNRPSQLSGGQQQRVAIARALV
NRPALVLADEPTGALDTETSYEVMSLLSELNQQGITIVIVTHEPDIAAQTQRIIRVQDGLIVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-37 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-37 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-37 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cylst_3420 YP_007148250.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 7e-58 55
Cylst_3420 YP_007148250.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 2e-49 51
Cylst_3420 YP_007148250.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 1e-40 47
Cylst_3420 YP_007148250.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 7e-39 46
Cylst_3420 YP_007148250.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686946. Protein 3e-30 42