Gene Information

Name : Cylst_3415 (Cylst_3415)
Accession : YP_007148245.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3892742 - 3893506 bp
Length : 765 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGGCAAACACTCTCACCATCACTGATTCCAGTATTCCCAGTCCCGTCTCCCAATCAACAATCATTCGCCTGGAGAATGT
TTTTAAGGTTTACGGCAGTGGCGAAACAGAAGTGCGAGCGCTCAATGATGTCAACTTGATGATTGAAGAAGGTGAATATT
GTGCAATTATGGGGCCTTCAGGTTCTGGTAAATCGACAGCGATGAATATTATTGGCTGTCTGGATCGCCCCAGTTCAGGA
CATTATTACCTAGATAACCTCGATGTAGCCCAAATAGATGATCGAGCGTTAGCGCGGATTCGGAATCAAAAGCTAGGGTT
TGTGTTCCAACAATTCCATTTATTAACGCAACTATCAGCACTTGAAAATGTGATGTTACCAATGGTGTATGCTGGTGTGA
AGCCGGATGAAAGACGCGATCGCGCCGCCGAGGCTCTGAAACGAGTGGGTTTATCCAACCGCCTCCACAACAAACCCACT
CAATTATCCGGAGGACAGCAACAACGAGTTGCGATCGCCCGCGCCATTGTTAACCGTCCTGTCGTACTCCTAGCCGATGA
ACCCACCGGCGCACTCGATTCGCGCACAACCCAAGAAGTATTGGATATTTTTACCGAACTCAATGCCAGTGGCATCACGG
TTGTGATGGTGACACACGAATCAGATGTTGCTCGTCAAACCAAGCGCATCGTTTGGTTTCGTGATGGTGAAGTAGTACAC
TCTCACATCACTCCATCTGAGTTAAATCAACTTGTCGTTTCTTAA

Protein sequence :
MANTLTITDSSIPSPVSQSTIIRLENVFKVYGSGETEVRALNDVNLMIEEGEYCAIMGPSGSGKSTAMNIIGCLDRPSSG
HYYLDNLDVAQIDDRALARIRNQKLGFVFQQFHLLTQLSALENVMLPMVYAGVKPDERRDRAAEALKRVGLSNRLHNKPT
QLSGGQQQRVAIARAIVNRPVVLLADEPTGALDSRTTQEVLDIFTELNASGITVVMVTHESDVARQTKRIVWFRDGEVVH
SHITPSELNQLVVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cylst_3415 YP_007148245.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 9e-60 54
Cylst_3415 YP_007148245.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 1e-48 50
Cylst_3415 YP_007148245.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 8e-38 44
Cylst_3415 YP_007148245.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 2e-33 41