Gene Information

Name : Cylst_2973 (Cylst_2973)
Accession : YP_007147824.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Unknown
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3438648 - 3441335 bp
Length : 2688 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB

DNA sequence :
TTGGCTCAAAGGAGGTTTCCTCGCGCCAGTATCCGCCTCTTTGCGTCGGTCGTGGTTTCTCTAAAGCCTATGCAACCTAC
TAATCCAAACAAGTTTACAGAAAAAGCCTGGGAAGCGATCGCGCATACCCAAGATGTTGTCAAACAATACCATCAGCAGC
AGATAGAAAGCGAACACCTGATGAAAGCGCTGCTGGAACAAGATGGTCTAGCCAGTGCGATCTTCACTAAAGCGGGTGCG
AACGAGCAAAAAGTGCGCGATCGCACCGACCAATTTCTCCGCCGCCAGCCAAAGGTATCCGGTAGCAGCAGTTCCGTTTA
TTTAGGAAGGAGTCTAGATACACTTTTAGACCGGGCTGACGCCTATCGCCAGGAATTTAAAGACGAATATATCTCCATTG
AACATTTAGTGCTGGCTTATGCCAAAGATGACCGCTTTGGTAAAGGTTTATTCCAAGAATTTGGTTTAGACGAAGGCAAG
CTGAAGAATATTATTAAACAAATTCGGGGGAGCCAGAAAGTGACCGACCAAAGCCCAGAAGGTAAATACCAATCACTGGA
AAAATATGGGCGCGACCTCACAGAAGCTGCTCGCAAAGGTCAACTTGATCCAGTGATTGGGCGGGATGACGAAATTCGGC
GGACGATTCAAATTCTCTCTCGCCGGACAAAAAATAATCCTGTGCTGATTGGTGAACCGGGTGTAGGGAAAACTGCGATC
GCTGAAGGACTAGCACAGCGCATCGTTGCTGGTGATGTTCCCCAGTCGCTGAAAGACCGGATGCTGATCTCTTTAGATAT
GGGCGCTTTGATTGCGGGGGCAAAATTCCGGGGTGAATTTGAAGAACGCCTGAAAGCAGTATTAAAAGAAGTTACGGAAT
CTGGCGGCAATATTGTTTTATTTATTGATGAAATTCACACCGTAGTCGGTGCAGGTGCGACTCAAGGGGCAATGGATGCC
GGTAACTTGTTAAAACCGATGTTGGCCCGGGGTGAGTTACGCTGTATTGGGGCAACAACTTTAGACGAGTACCGCAAGCA
TATCGAAAAGGATGCGGCGCTAGAACGACGCTTCCAGCAGGTTTATGTAGATCAGCCGAATATCGAAGATACGATTTCGA
TTTTGCGCGGGTTGAAAGAACGTTATGAAGTCCACCACGGGGTAAAGATTTCTGATAGTTCTTTGGTGGCGGCTGCTACC
TTATCCAGCCGCTATATTAGCGATCGCTTTTTACCAGACAAAGCCATCGACTTGGTAGACGAAGCCGCCGCTAGACTGAA
AATGGAGATTACCTCCAAACCCGAAGAACTCGACGAAATCGACCGCAAAATCTTGCAATTGGAAATGGAGAAGCTTTCTT
TGCAAAAAGAAAGTGATGTCGCTTCTCGTGAACGCCTAGAAAAAATCGAAAAAGAACTGGCGGATCTCAAAGAAGAACAA
AGAACCCTGAGTTCACAATGGCAATCTGAAAAAGACATCATCAACAAAATTCAGTCTGTTAAAGAAGAGATTGACCGAGT
TAACCTAGAAATTCAGCAAGCCGAAAGAAACTACGACCTCAACCGGGCGGCAGAGTTGAAATATGGTAAACTAACAAGCC
TGCATCGTCAATTGGAAGCCGTAGAAGCTGAACTTACACAAGCCCAAGGATCTGGTAAATCACTTTTGCGGGAAGAAGTC
ACAGAAGCCGATATTGCCGAAATTATATCTAAGTGGACGGGGATTCCCATCAGCAAATTGGTGGAATCAGAAAAAGAAAA
ATTACTGCATTTAGAAGATGAACTACACCGCCGTGTCGTCGGACAAGCTGAAGCAGTCACAGCGGTAGCCGATGCCATTC
AGCGATCGCGCGCTGGACTTGCTGATCCTAATCGTCCCATTGCGAGTTTTGTTTTCCTTGGCCCCACTGGTGTCGGTAAA
ACCGAACTAGCCAAAGCCCTAGCGGCCTATATGTTCGACACAGAAGAGTCCTTGGTGCGGATTGATATGTCGGAGTATAT
GGAGAAACACACAGTTTCTCGCCTCATCGGTGCGCCTCCGGGATATGTGGGTTATGAAGAAGGCGGACAATTAACCGAAG
CGATTCGCCGTCGTCCCTATGCTGTGATTCTCTTCGACGAAATCGAGAAAGCACACCCCGATGTGTTTAATATTTTCCTG
CAAATTCTCGATGATGGTCGGGTCACCGATGCCCAAGGTCATACGGTGGACTTCAAGAACTGTATCATCATCATGACTAG
CAATATCGGTTCACAGTACATTCTGGATATTGCCGGGGATGATTCCCGCTATGATGAAATGCATCGTCGGGTGATGGAGG
CGATGCGAAATAGTTTCCGTCCAGAGTTCCTCAACCGGATTGACGAAATTATCATCTTCCACAGCTTGCAGAAATCAGAA
TTGCGGCGGATTGTGTTGTTGCAAGTGGAAAGACTGCGGCAACGATTAAGCGACCGCAAAATGTCCCTCAGGCTCTCGGA
TGCGGCTCTTGACTTTTTAGCAGAAGTAGGATATGATCCTGTTTTTGGAGCGCGGCCACTAAAGCGAGCAATTCAGCGAG
AGTTAGAAACTCAAATTGCCAAAGCTATCTTGCGCGGCGAATTCAATGACGGCGACACCATCTTTGTGGATGTGCAAAAT
GAACGCCTTTCCTTCAGCCGCTTACCCATAGAAGTGTTTACTGGTTAA

Protein sequence :
MAQRRFPRASIRLFASVVVSLKPMQPTNPNKFTEKAWEAIAHTQDVVKQYHQQQIESEHLMKALLEQDGLASAIFTKAGA
NEQKVRDRTDQFLRRQPKVSGSSSSVYLGRSLDTLLDRADAYRQEFKDEYISIEHLVLAYAKDDRFGKGLFQEFGLDEGK
LKNIIKQIRGSQKVTDQSPEGKYQSLEKYGRDLTEAARKGQLDPVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAI
AEGLAQRIVAGDVPQSLKDRMLISLDMGALIAGAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDA
GNLLKPMLARGELRCIGATTLDEYRKHIEKDAALERRFQQVYVDQPNIEDTISILRGLKERYEVHHGVKISDSSLVAAAT
LSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDRKILQLEMEKLSLQKESDVASRERLEKIEKELADLKEEQ
RTLSSQWQSEKDIINKIQSVKEEIDRVNLEIQQAERNYDLNRAAELKYGKLTSLHRQLEAVEAELTQAQGSGKSLLREEV
TEADIAEIISKWTGIPISKLVESEKEKLLHLEDELHRRVVGQAEAVTAVADAIQRSRAGLADPNRPIASFVFLGPTGVGK
TELAKALAAYMFDTEESLVRIDMSEYMEKHTVSRLIGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFL
QILDDGRVTDAQGHTVDFKNCIIIMTSNIGSQYILDIAGDDSRYDEMHRRVMEAMRNSFRPEFLNRIDEIIIFHSLQKSE
LRRIVLLQVERLRQRLSDRKMSLRLSDAALDFLAEVGYDPVFGARPLKRAIQRELETQIAKAILRGEFNDGDTIFVDVQN
ERLSFSRLPIEVFTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-102 42