Gene Information

Name : Cylst_2650 (Cylst_2650)
Accession : YP_007147533.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase, B subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3113534 - 3115636 bp
Length : 2103 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit

DNA sequence :
ATGAAAGCGGCACCTACCTCAAAACCTAGATCTCCACGTAATCGTCCTAGCGATCGCCGTCAAGGACGCAAAAAGGCGCG
GTTAAGTAAAAAATGGCTCTACCTTAGGGCAATCAGGGATGCTTTTGTCAAGCTTCATCCCAAACAGGCCATCAAAAATC
CCGTGATGTTTTTGGTTTGGGTCGGGACAATCATCACCCTGACAGTGACAATTGATCCCGACCTGTTTGGGCCAACCCCC
CAGAATAACCCACGACTTTTCAATGGCTTATTGACAGCAATTTTGTTCTTCACCGTTTGGTTTGCCAATTTTGCCGAAGC
AGTGGCAGAAGGGCGGGGTAAAGCCCAAGCCGATGCTTTACGATCGACAAAATCGGAAACGACCGCCAAAAAACTCGCAG
ATGACGGCACAATTACGCAAGTCCCTTCCACCAGTTTGAAAAAGGGCGATAACATCTACGTGGTTGCTGGTGATATGATT
CCCGCCGATGGCGAAGTGATTATGGGTGTCGCCTCAGTCGATGAATCGGCAATCACTGGAGAATCAGCACCAGTCCTCAA
AGAATCAGGTTCAGACGTTGCCAGTTCTGTCACAGGTGGTACCCGGATTATCTCCGACGAACTAATTATCCGCATCACCG
CTGACCCAGGTAGAGGGTTTATTGACCGGATGATTGCCTTAGTCGAAGGGGCAGAACGCAGCAAAACGCCGAATGAAATC
GCTTTAACAGTGTTGCTGGCAGTTCTCAGCTTAGTATTTCTGTTTGTGGTGGCAACTCTGCCCGCCTTCGCCTACTATGT
TAAAAGTCCAATCAGCGTACCGGTCTTAATTGCCCTGTTAGTAGCCCTCATCCCCACAACCATTGGCGGCTTACTCAGTG
CGATCGGCATCGCCGGCATGGATCGAGTAGCTCAATTTAACGTCATTGCCACCTCAGGACGCGCAGTCGAAGCTTGCGGT
GATATCAACACCCTAATTTTGGACAAGACAGGTACAATTACCCTCGGTAACCGCTTGGCAGAAGAGTTTATCCCGATCAA
CGGCCATTCAATGTCAGAAATTGCTAGTGTTGCTTGGGCAGCAAGCGTTTTTGATGATACCCCAGAAGGTAAATCCATTG
TGCGATTGGCAGAAAAGTTAGGCGCAAAGTTCGATTTTGACCGCAACTCCGCCCAAGGACTGGAATTTTCCGCCAAAACG
CGCATGAGTGGCACTAACTTACCCGGTGGACGTGAGGTACGCAAGGGAGCAGTGGGAGCAATTCAAGGATTTGTCCGTTC
CCGCAACGGACGTGAGACCCCAGAACTAAATGCTGCCTATGAACGAGTATCCCAATTAGGAGGTACACCCCTGGCTGTTT
GCTTAGATAACGAAATCTACGGTGTTGTCTATCTCAAAGACATTGTCAAACCTGGTATTCGCGAACGTTTTGACCAACTG
CGGCGGATGGGAGTGCGTACCGTGATGCTGACTGGTGATAACCGAATTACCGCTGCTGTGATTGCCAAGGAAGCTGGGGT
AGATGACTTCATCGCCGAAGCCACACCAGAAGATAAAATCAGCGTCATTCAACGGGAACAGGCAGAAGGTAAACTGGTGG
CAATGACTGGGGACGGGACTAATGATGCTCCAGCCCTGGCTCAAGCTAATGTCGGCGTCGCCATGAATACAGGCACCCAA
GCGGCTAAAGAAGCAGCTAATATGGTGGATTTGGACTCCGATCCCACAAAGCTGATCGATATTGTCAGCATTGGTAAACA
ATTGCTGATTACTCGTGGGGCATTGACGACATTTTCTCTCGCCAATGATATTGCTAAATACTTTGCAATTATCCCAGTGA
TCTTTGCTGCTGCTAACCTGGAGAGCTTGAATATTATGAAGTTAACCAGCACTAACTCTGCCATATTATCAGCACTGATT
TACAATGCTTTGATTATTCCTGCTTTGATTCCCTTGGCATTGAAGGGCGTGCAGTTTCGACCCTTGACAGCTAATCAACT
GCTACTACGCAATATCTTAATTTATGGCTTAGGTGGAGTGATTGCGCCGTTTATCGCCATTAAGTTAATAGATATGCTCA
TCACAGTTGTGGGATTAGCTTAA

Protein sequence :
MKAAPTSKPRSPRNRPSDRRQGRKKARLSKKWLYLRAIRDAFVKLHPKQAIKNPVMFLVWVGTIITLTVTIDPDLFGPTP
QNNPRLFNGLLTAILFFTVWFANFAEAVAEGRGKAQADALRSTKSETTAKKLADDGTITQVPSTSLKKGDNIYVVAGDMI
PADGEVIMGVASVDESAITGESAPVLKESGSDVASSVTGGTRIISDELIIRITADPGRGFIDRMIALVEGAERSKTPNEI
ALTVLLAVLSLVFLFVVATLPAFAYYVKSPISVPVLIALLVALIPTTIGGLLSAIGIAGMDRVAQFNVIATSGRAVEACG
DINTLILDKTGTITLGNRLAEEFIPINGHSMSEIASVAWAASVFDDTPEGKSIVRLAEKLGAKFDFDRNSAQGLEFSAKT
RMSGTNLPGGREVRKGAVGAIQGFVRSRNGRETPELNAAYERVSQLGGTPLAVCLDNEIYGVVYLKDIVKPGIRERFDQL
RRMGVRTVMLTGDNRITAAVIAKEAGVDDFIAEATPEDKISVIQREQAEGKLVAMTGDGTNDAPALAQANVGVAMNTGTQ
AAKEAANMVDLDSDPTKLIDIVSIGKQLLITRGALTTFSLANDIAKYFAIIPVIFAAANLESLNIMKLTSTNSAILSALI
YNALIIPALIPLALKGVQFRPLTANQLLLRNILIYGLGGVIAPFIAIKLIDMLITVVGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 6e-134 57
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 1e-133 57
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-134 57
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-134 57
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-134 57
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 9e-134 57
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 2e-127 55
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-127 55