Gene Information

Name : Cylst_2622 (Cylst_2622)
Accession : YP_007147506.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Unknown
Product : transposase, IS605 OrfB family, central region
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3075818 - 3077050 bp
Length : 1233 bp
Strand : -
Note : PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region

DNA sequence :
TTGCTACACAAGGCTGTTCAGGTTCGTATATACCCATCAAAAGAACAAAAAACACAACTAGCGCAAGCTTTTGGATGTGC
TAGATGGTGGTGGAATTATGCTCTAAACAAGTCAATTGAAACTTACAAAGAGACGGGTAAAGGACTTAACCGTGCTGCAC
TCAACGCATTTCTTCCTATACTCAAGAAAGCAGAAGATACTATTTGGCTAGGTGATTGTTACAGCCAAGTTTTACAAGCT
ACAACACTAAATCTAACCACAGCATACAAAAACTTTTTTGATAAACGTGCGGGGTTTCCTAAGTTCAAATCTAAGCATGG
AAAACAGTCTATTCAATATCCTCAAAACGTCAAAATTGTAGATGGTAATATCAAAATTCCCGGCAATATCGGAATAGTCA
AAGCCAAAATACATAGACCAGTTGAGGGGAAAATCAAGACTGTAACTGTATGTAAAACACCATCAGGTAAATATTTTGTA
TCTATCCTGACGGAAGTAGAAGGGGAAAATCCAACTATTACATTCGGGAAGATTTACGGTATTGATTTAGGGTTGAAGCA
TTTTGCTGTTGTTACTGATGGCGAAAAAGTTTCTCAGTATGATAATCCTAAACACCTTGCCAAGTACGAAAATAATCTCA
AGCGCAAGCAGAAAAAATTAGCACGTAAACAAAAAGGTAGTAAATCAAGAAATAAATATCGCCAAGTTGTTGCTAAAGTG
TACGAACGAATTAGTAATTCTAGGCAAGATTTTCTGCATAAACTTAGCTATAAGTTGGTCAGCGATAGTCAAGCTGTTAT
AGTAGAGAGTCTTCATGTCTTGGGCATGGTTCGTAATCACAATTTGGCAAAATCAATATCTGATGCAGGATGGGGAACAT
TCACCAATTTTCTAGCCTATAAGCTAGAATGCAAAGGCGGAAAGTTGGTTGAGATTGATAGATGGTTTCCCAGTTCCAAG
CTCTGTTCTAATTGTTTCTATCAAGTGAGTGAGATGCCATTGGATGTCCGTGAATGGACTTGTCCTCATTGTGGCACTCA
TCATGATCGTGATGGAAATGCAGCGATAAATATTAGAGCAGAAGGTATCAGATTGATAAAGGCGGAAGGTTCAGCCGTCT
CTGCTGTAGGAGGGGGGATAAGACCAAAATTTGGGCGAAAGTCTAAGTTGCGGCACTCCCCCGTGAGTACAGAAGCCGAC
ACTGTACTTGGTACTCCAAGTCAGTGTGGGTAG

Protein sequence :
MLHKAVQVRIYPSKEQKTQLAQAFGCARWWWNYALNKSIETYKETGKGLNRAALNAFLPILKKAEDTIWLGDCYSQVLQA
TTLNLTTAYKNFFDKRAGFPKFKSKHGKQSIQYPQNVKIVDGNIKIPGNIGIVKAKIHRPVEGKIKTVTVCKTPSGKYFV
SILTEVEGENPTITFGKIYGIDLGLKHFAVVTDGEKVSQYDNPKHLAKYENNLKRKQKKLARKQKGSKSRNKYRQVVAKV
YERISNSRQDFLHKLSYKLVSDSQAVIVESLHVLGMVRNHNLAKSISDAGWGTFTNFLAYKLECKGGKLVEIDRWFPSSK
LCSNCFYQVSEMPLDVREWTCPHCGTHHDRDGNAAINIRAEGIRLIKAEGSAVSAVGGGIRPKFGRKSKLRHSPVSTEAD
TVLGTPSQCG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0626 YP_697953.1 ISCpe2, transposase orfB Not tested Not named Protein 1e-46 41