Gene Information

Name : Cylst_2581 (Cylst_2581)
Accession : YP_007147467.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3026315 - 3027091 bp
Length : 777 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGCCCCTCGAACTGCAAAATCTCACAGGTGGTTACACCAATACACCAATTATTCAAAACATTAACCTCACCTTACAAAC
AGGAGAATGGTTAAGTTTAGTTGGCGCTAATGGTTCCGGTAAGTCAACATTACTCAAATTGCTCAGTCGCATTCTTTCGC
CACAGCAGGGAATAGTGCTACTCGATGGTAAAGCAATTCACTCTCAACCCCCAAATTTAGTTGCTCAAAAATTGGCATTG
TTACCGCAACAACAAACGGTTCCTGTGGGCTTAACAGTTCGGCAATTAGTTGGTTTAGGACGTACGCCCCATCAGCCTTG
GTGGCAATGGGAATTAACCGCCGAAGATTGGCATAAAGTAACAGCAGCAATCAAAAAAACACAACTTGAAAACTTAAGCG
ATCGCCTAATCGAAGAACTATCCGGCGGTGAAAGACAACGGGCTTTTTTAGCTTTATCTCTGGCACAAGAACCAAAAGTT
TTATTATTAGATGAACCCACAACCTATCTAGATATTAACTACCAACTACAACTCTTAGAACTACTCAAAGATTTAAATCA
GCAGCAAAAACTAACCATCGTCACAGTTTTACACGAATTGAATTTAGCAGCGCGTTACAGTTCCCGTATTGCCTTATTAA
AACAGGGTCATCTTCGGGAAGTTGGCACACCAGAAGCAGTGCTAACACCAAACACCATCGCTCAAGTTTTTGGGGTAGAA
TCTGTGATTATTCAGACGCCTGTGGGGTTGCAGGTTTGTGCCCTATCTCCAGTGTGA

Protein sequence : 
MPLELQNLTGGYTNTPIIQNINLTLQTGEWLSLVGANGSGKSTLLKLLSRILSPQQGIVLLDGKAIHSQPPNLVAQKLAL
LPQQQTVPVGLTVRQLVGLGRTPHQPWWQWELTAEDWHKVTAAIKKTQLENLSDRLIEELSGGERQRAFLALSLAQEPKV
LLLDEPTTYLDINYQLQLLELLKDLNQQQKLTIVTVLHELNLAARYSSRIALLKQGHLREVGTPEAVLTPNTIAQVFGVE
SVIIQTPVGLQVCALSPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-31 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-31 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-37 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-32 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-26 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-26 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-26 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cylst_2581 YP_007147467.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component BAC0164 Protein 9e-38 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cylst_2581 YP_007147467.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG1042 Protein 8e-38 43
Cylst_2581 YP_007147467.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG0925 Protein 4e-29 43