Gene Information

Name : Cylst_2255 (Cylst_2255)
Accession : YP_007147165.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Virulence
Product : ATPase component of Mn/Zn ABC-type transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2644589 - 2645416 bp
Length : 828 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGCAAAACGTCTCTTTTTACCAGAAAATTAGCCAATCTCAGCGACAAGCTGGAGAGATACCTGCACAAGTTATTAAATC
TATTGACATGAATTCCCCAGCAGCAATTAACATCGCTCATTTAGGAGTACACTACCGTACGCAAGAAGCCTTGAGGGACG
TTAACTGTATTGTTAAACCGGGGCGACTGACGGGTATTTTCGGACCTAATGGTGCGGGTAAAAGTACGTTAATGAAAGGC
ATATTGGGGTTAGTTCCCCTGAGCAGTGGCTCAGTTTTATACCAAAATCAGCCCTTGATGCAGCAACTAGACAAAGTTGC
CTATGTGCCACAGCGTAGCCAAATAGACTGGACTTATCCCGCGACAGTTTGGGATGTGGTGATGATGGGACGGGTGAAAA
AAACCGGCTGGTTACGCAGTTTCTCAGCCGTCAGCCGCCAAGTAGCAAAAAATGCCATAGAAAGAGTGGGGATGAGTGCT
TACGGCGATCGCCCGATTGGCGAACTTTCTGGAGGACAACAACAACGGGTATTTTTAGCCCGTGCCTTAGCCCAGCAAGC
AGATATTTTCTGTTTTGATGAACCATTGGTAGGCATTGATCAGAAAACCCAGGCAGTGATTTTTGAAGTTTTCCACGAAC
TCACTACCGCTGGCAAAATCGTCCTAGTAGTCAACCACGACTTAGGCGAATCAATCACCCACTTTGATGATTTAATCTTA
CTAAATCGTGAATTAATTGCCACAGGTTCACGACAACAAGTACTCACAGAAGAAAACTTAAATCTTGCTTATAGCGGTAA
AGTAATGTATTTCTCCGATGCTGCGTAA

Protein sequence : 
MQNVSFYQKISQSQRQAGEIPAQVIKSIDMNSPAAINIAHLGVHYRTQEALRDVNCIVKPGRLTGIFGPNGAGKSTLMKG
ILGLVPLSSGSVLYQNQPLMQQLDKVAYVPQRSQIDWTYPATVWDVVMMGRVKKTGWLRSFSAVSRQVAKNAIERVGMSA
YGDRPIGELSGGQQQRVFLARALAQQADIFCFDEPLVGIDQKTQAVIFEVFHELTTAGKIVLVVNHDLGESITHFDDLIL
LNRELIATGSRQQVLTEENLNLAYSGKVMYFSDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-38 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-38 44
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-38 43
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 4e-38 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-37 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-37 43
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cylst_2255 YP_007147165.1 ATPase component of Mn/Zn ABC-type transporter BAC0400 Protein 7e-41 47
Cylst_2255 YP_007147165.1 ATPase component of Mn/Zn ABC-type transporter BAC0350 Protein 1e-37 43
Cylst_2255 YP_007147165.1 ATPase component of Mn/Zn ABC-type transporter BAC0440 Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cylst_2255 YP_007147165.1 ATPase component of Mn/Zn ABC-type transporter VFG0526 Protein 1e-37 43