Gene Information

Name : Cylst_1791 (Cylst_1791)
Accession : YP_007146732.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.1
Position : 2075761 - 2077773 bp
Length : 2013 bp
Strand : +
Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast

DNA sequence :
ATGGCAGTTGCAACCCAATCCCTCGAAGAACTTTGTATTAACTCGATCCGCTTCTTGGCTGTTGACGCCATAGAAAAGTC
AAAATCGGGACATCCTGGACTGCCAATGGGCGCGGCTCCGATGGCTTTTGTACTTTGGGATAAATTTATGCGGTTTAACC
CCAAAAATCCCCAATGGTTTAATCGCGATCGCTTCGTCTTGTCTGCTGGTCACGGCTGTATGTTGCAGTACGCCTTGCTG
TACCTGACAGGCTACGATAGCGTCACCATCGACGACATTAAGCAATTCCGTCAATGGGGTTCTAAAACTCCCGGACACCC
AGAAAACTTTGAAACACCAGGTGTAGAAGTAACCACAGGCCCCTTGGGTCAGGGAATTGCCAATGCCGTCGGTTTAGCGA
TCGCCGAAGCCCATCTCGCTGCTAAGTTCAACAAACCCGATGCCAAGTTAGTTGACCACTACACCTATGTAATTGTCGGT
GATGGTTGCAACATGGAAGGCGTTTCTGGTGAAGCTGCTTCTTTCGCAGGGCATTTGGGATTAGGTAAACTCATTGCTCT
CTACGACGATAACCACATCTCCATCGATGGTTCTACAGATGTAGCATTCACCGAAGATGTTTCCAAGCGATTTGAAGCAT
ACGGTTGGCACGTCCTCCATGTCGAAGATGGCAATACCGATTTAGCAGCAATTGAAAAAGCGATCGCCGCAGCCAAAGCC
GTCACCGACAAACCAACCCTAATTAAGGTAACAACCACCATTGGTTACGGTTCCCCCAACAAGCAAAACACCGCTGGTAT
TCACGGTGCAGCCTTGGGTCCAGACGAAACAGCATTAACTCGTCAAAACTTGGGTTGGCAACACGGGCCTTTTGAAGTTC
CTCAAGATGCCCTCAACCACACACGCAAAGCAGTAGAACGCGGCGCAGGCTACGAAAGCGACTGGAACAAGACTTTTGCT
GACTACAAAGCTAAATATCCCCAAGAAGCGGCTGAATTTGAGCGTCTTCTTAGCAGCAAACTACCTGACGGTTGGGATAA
AGTACTACCCACCTACACCGCCGAAGACAAAGCACTACCCACCCGCAAACACTCAGAAACCTGCCTCAACAAACTAGCTC
AAGTTTTACCTGAGTTAATTGGTGGTTCTGCTGACTTAACCCACTCCAACCTGACTGAAATCAAGGGCTTTGGCGACTTT
CAGAAAGGACAATACCAAAATCGCAACATCCACTTTGGTGTGCGGGAACATGGTATGGGCGCAATCTGTAATGGTATAGC
GTTGCATAATTCGGGATTAATTCCCTACGGTGCGACTTTCCTAATCTTCACAGATTATATGCGTGCTGCTATTCGTTTAG
CCGCTTTGTCTCAAGCAGGCTCGATTTGGGTAATGACCCACGACTCCATTGGTCAAGGTGAAGATGGCCCCACCCACCAA
CCAATTGAAACGCTAGCTTCCCTGCGAGCCATTCCTGACCTCACTGTAATTCGCCCCGCAGACGGAACCGAAACCTCCGG
CGCTTACAAAGTGGCAATTGAAAAGGCCAGCCAAAATGCTTCCACTCTGTTGGCATTCAGCCGCCAAAACGTCCCTAACT
TAACAGGTACATCTATTGAAGGCGTGACTAAGGGTGGATACATTCTGGTAGATAGCCAAGGTACACCAGATATCATCCTC
ATTGGAACTGGTTCAGAGTTGAGCCTAGCTGTCACCGCAGCTGAGAAACTGACAGCGGAAGGTAAGAAAGTCCGTGTTGT
CTCCCTACCTTCAACCACTTTGTTTGACAAACAAGATGCAGCTTATAGAGAGTCTGTTCTACCTAAAGCTGTCACCAAGC
GTCTGTCTGTAGAAGCTGCTAGCAGTTACGGTTGGCACAAGTATGTAGGCACTGAAGGCGACACCGTGAGTATCGATACC
TTTGGTGCTTCGGCTCCAGGTGGTACTTGTCTGGAGAAGTTTGGTTTCACTGTTGAGAATGTGTTAGCTAAAGCTAAGGC
ATTGTTGGGTTAA

Protein sequence :
MAVATQSLEELCINSIRFLAVDAIEKSKSGHPGLPMGAAPMAFVLWDKFMRFNPKNPQWFNRDRFVLSAGHGCMLQYALL
YLTGYDSVTIDDIKQFRQWGSKTPGHPENFETPGVEVTTGPLGQGIANAVGLAIAEAHLAAKFNKPDAKLVDHYTYVIVG
DGCNMEGVSGEAASFAGHLGLGKLIALYDDNHISIDGSTDVAFTEDVSKRFEAYGWHVLHVEDGNTDLAAIEKAIAAAKA
VTDKPTLIKVTTTIGYGSPNKQNTAGIHGAALGPDETALTRQNLGWQHGPFEVPQDALNHTRKAVERGAGYESDWNKTFA
DYKAKYPQEAAEFERLLSSKLPDGWDKVLPTYTAEDKALPTRKHSETCLNKLAQVLPELIGGSADLTHSNLTEIKGFGDF
QKGQYQNRNIHFGVREHGMGAICNGIALHNSGLIPYGATFLIFTDYMRAAIRLAALSQAGSIWVMTHDSIGQGEDGPTHQ
PIETLASLRAIPDLTVIRPADGTETSGAYKVAIEKASQNASTLLAFSRQNVPNLTGTSIEGVTKGGYILVDSQGTPDIIL
IGTGSELSLAVTAAEKLTAEGKKVRVVSLPSTTLFDKQDAAYRESVLPKAVTKRLSVEAASSYGWHKYVGTEGDTVSIDT
FGASAPGGTCLEKFGFTVENVLAKAKALLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 4e-155 54
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-154 53