Gene Information

Name : Cylst_1053 (Cylst_1053)
Accession : YP_007146050.1
Strain : Cylindrospermum stagnale PCC 7417
Genome accession: NC_019757
Putative virulence/resistance : Resistance
Product : ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1217339 - 1218112 bp
Length : 774 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGACTTTAACTGCAATGAAAGGTACACATCTAAATATTTTAGATTTGACCAAAACTTTTGGTCAAAAGAATGTTTTAAG
TTCAGTGAATTTAGAAGTGCAGCCAGGAGAATTTGTGGCGATAGTTGGGCGTAGTGGTTGTGGTAAAAGTACTTTATTGC
GTCTGGTATCGGGATTAGAGAAATCGTCTTCTGGTGGAGTCTTACTAGATGGAGAACCCCTGCGTAAACTTAGCGGCTCT
GTAAGAATGATGTTTCAAGACTCGCGGTTGCTCCAATGGAAGCGCGTGATTGAGAATGTAGGCTTGGGCTTGCAAAATAA
TTGGCGAGCAAGGGCTGAATGGGCACTAGAGCAAGTTGGACTCAAGGACAGAGCAGAAGAGTGGCCATCAGTACTTTCTG
GAGGACAGCGCCAACGGGTGGCACTAGCCAGGGCGTTAGTCAGTCAGCCACGTTTGTTATTGCTCGATGAGCCTTTGGGA
GCCTTGGATGCTCTAACCCGTATTGAGATGCAACGGTTGATTGAGCAGTTATGGCAAGAGCAACAATTTACCTCGCTTCT
AGTTACCCATGATGTAGAAGAAGCGGTGGCGTTAGCAGACCGCGTAATCCTGATTGAAGAAGGAAGGATTACGCTCAACC
TCCCTGTGAATCTTTCACGTCCTCGTGACAGAGCTAGTGAAGAGTTTATCGACCTGAGAGAAACCGTTCTAGACCGAGTG
ATGAGTCGTGAAAGCAGCCACATAAATAAAGAATTATTGCAGTTGAGTAAATAA

Protein sequence : 
MTLTAMKGTHLNILDLTKTFGQKNVLSSVNLEVQPGEFVAIVGRSGCGKSTLLRLVSGLEKSSSGGVLLDGEPLRKLSGS
VRMMFQDSRLLQWKRVIENVGLGLQNNWRARAEWALEQVGLKDRAEEWPSVLSGGQRQRVALARALVSQPRLLLLDEPLG
ALDALTRIEMQRLIEQLWQEQQFTSLLVTHDVEEAVALADRVILIEEGRITLNLPVNLSRPRDRASEEFIDLRETVLDRV
MSRESSHINKELLQLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-38 50
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-18 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-20 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-20 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-20 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cylst_1053 YP_007146050.1 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component NC_012469.1.7686878. Protein 2e-20 42