Gene Information

Name : Cri9333_4618 (Cri9333_4618)
Accession : YP_007144908.1
Strain : Crinalium epipsammum PCC 9333
Genome accession: NC_019753
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5212124 - 5214781 bp
Length : 2658 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR0177

DNA sequence :
ATGCAGCCAACTGACCCTACCAAATTTACTGAAAAAGCTTGGGATGCGATCGTAAAATCGCAAGATGTAGCTCGTCGCTT
CAAAAATCAGCAGCTAGAGGTAGAGCATTTGGCGATCGCACTTCTAGAACAAGATGGACTGGCAACGCGCCTATTGTCTC
GTGCTAACGTAGATGTATCCAGCCTCAAAACCCAACTAGAAACCTTCGCATCCCGACAACCCAAAGTAGGTCAACTTGAC
CAACTATATTTGGGTCGCTCATTGGATGTAATGTTAGATAGGGCTGAAACAGCTAGATCTAGTTGGCAGGATGAATTTAT
TGCGATTGAACATTTATTAATCGGCTTAATAGAAGATGAAAGAGTCGGTCGCAAATTAGCCAAAAGCTTTAACCTAGACT
TACCAAAGCTAGAAACTATTATTAAGGATGTTCGGGGAAGCCAAAAAGTTACCGATCAAAATCCCGAAGGACGCTACGAA
GCCTTAGAAAAGTATGGACGCGACCTCACCGAACAAGCAAAAGCTGGCAAAATTGACCCTGTAATTGGACGAGATGAAGA
AATTCGCCGTGTAGTACAAGTATTATCCCGTCGTTCAAAAAATAACCCTGTATTAATTGGGGAACCTGGAGTTGGTAAAA
CTGCCATCATCGAAGGATTAGCCCAACGTATTGTTAAAGGCGATGTGCCAGAATCTTTAAAAAACCGCAAGTTAATCGCC
TTAGATATGGGCAGCTTAATTGCTGGCGCTAAATATCGCGGAGAATTTGAAGATAGACTGCGGGCAGTATTACGAGAAGT
TACTCATTCAGATGGTCAAATTGTCTTATTTATAGATGAGTTACACACCGTCGTTGGTGCTGGTGCGCCTCAAGGCGCAA
TGGATGCAAGTAACTTACTCAAACCCATGTTAGCGCGGGGTGAATTGCGTTGTATGGGCGCAACCACCTTAGATGAGTTC
CGCAAACATATTGAAAAAGATGCCGCTTTAGAACGCAGATTTCAACAAGTTTACGTTAAGGAACCAACGGTAGAAGATAC
TATTTCTATACTGCGAGGCTTGAAAGAACGCTACGAAGTTCATCACGGTGTAAAAATAACTGATTCTGCCTTAGTAGCTG
CTGCAACTCTTTCTAACCGCTACATTTCAGACCGATTTTTACCAGATAAAGCAATTGACTTGGTAGACGAAGCTGCTGCT
AAGTTAAAAATGGAAATAACTTCCAAACCTGCGGAACTAGAAGCAATTGATCGGCGGTTGATGCAGCTAGAGATGGAAAA
ATTATCTTTAGCAGGAGAAAGCGATCGCAAAGCTGTTACTACTGTTTATAGTTCATCGCGGGAACGCTTGGAACGGATTG
AACAGGAAATGGGGATTTTACGGGACAAACAAGAACAATTTAACTCTAAATGGCAAGGTGAAAAGCAACTTTTAGATGCC
ATCAATGCCATGAAGGAGGAAGAAGACCAGCTTAAGGTACAAATTGAACAAGCAGAACGTGCTTATGATTTAAATAAAGC
TGCTCAACTTAAGTATGGACGATTAGAAGGTGTGCAGCGCGATCGCGAAGCTAAAGAAGCTCAACTTTTAGAAATTCAAA
CAGGCGGATCTGCTTTATTACGCGAACAAGTATCCGAAGCTGATATTGCTGAAATTGTCGCTAAGTGGACAGGTATCCCC
GTTAACAGTTTACTAGAATCAGAACGCCAAAAACTTCTCAAACTCGAATCCCACCTACATCAACGGGTAATCGGTCAACA
AGAAGCCGTTGCCGCCGTCTCTGCGGCTATTCGTCGCGCCCGTGCTGGGATGAAAGATCCTGGTCGTCCTATTGGTTCTT
TCCTATTTATGGGACCAACAGGGGTAGGTAAAACAGAACTTGCCCGCGCCTTAGCGCAGTTCCTCTTTGATAGTGAGGAA
GCTTTAGTGCGAATTGATATGTCTGAATACATGGAGAAACACGCCGTTTCTAGGTTAGTCGGCGCACCTCCAGGGTATGT
AGGATATGAAGAAGGCGGTCAACTTTCCGAAGCAATACGTCGTCGTCCCTACTCGGTGGTACTTCTAGACGAAGTTGAAA
AAGCGCATCCTGATGTCTTCAATATTCTATTGCAAGTATTAGACGATGGCAGAATTACAGATTCTCAGGGTAGAACTGTT
GATTTTTGCAATACCGTAATAGTAATGACCAGTAATATTGGCAGTGACCATATACTGAATATTTCAGGTGATGATTCTCA
ATATGATGAGATGCAGAAACGAGTAACAGATGCGTTGCGATCGCACTTCCGTCCCGAATTTCTCAACCGCATTGACGACT
TGATCATCTTCCACACCCTGAACCGTAACGAACTCAGTCAAATCGTTAACATTCAAATCAAGCGTATTGAACAACTATTA
GCTGACCAAAAAATTAAAATAGAACTCTCCCCAACAGCCCAAGCCCACCTAGCAGAAGCAGGCTACGATCCAGTTTATGG
AGCAAGACCTCTAAAACGAGCAATCCAAAGGGAACTTCAAAACCCCATTGCTACCAAAATCCTCGAAAATACCTTCCTTG
AGGGGGATACAATTTTAGTCGATTCTGACAATGATTCTCTCACATTCAGCAAAAAAGCGCTACTAACCTTGCCAGAGGTT
CAGATTGTCCAAATCTAA

Protein sequence :
MQPTDPTKFTEKAWDAIVKSQDVARRFKNQQLEVEHLAIALLEQDGLATRLLSRANVDVSSLKTQLETFASRQPKVGQLD
QLYLGRSLDVMLDRAETARSSWQDEFIAIEHLLIGLIEDERVGRKLAKSFNLDLPKLETIIKDVRGSQKVTDQNPEGRYE
ALEKYGRDLTEQAKAGKIDPVIGRDEEIRRVVQVLSRRSKNNPVLIGEPGVGKTAIIEGLAQRIVKGDVPESLKNRKLIA
LDMGSLIAGAKYRGEFEDRLRAVLREVTHSDGQIVLFIDELHTVVGAGAPQGAMDASNLLKPMLARGELRCMGATTLDEF
RKHIEKDAALERRFQQVYVKEPTVEDTISILRGLKERYEVHHGVKITDSALVAAATLSNRYISDRFLPDKAIDLVDEAAA
KLKMEITSKPAELEAIDRRLMQLEMEKLSLAGESDRKAVTTVYSSSRERLERIEQEMGILRDKQEQFNSKWQGEKQLLDA
INAMKEEEDQLKVQIEQAERAYDLNKAAQLKYGRLEGVQRDREAKEAQLLEIQTGGSALLREQVSEADIAEIVAKWTGIP
VNSLLESERQKLLKLESHLHQRVIGQQEAVAAVSAAIRRARAGMKDPGRPIGSFLFMGPTGVGKTELARALAQFLFDSEE
ALVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLSEAIRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTV
DFCNTVIVMTSNIGSDHILNISGDDSQYDEMQKRVTDALRSHFRPEFLNRIDDLIIFHTLNRNELSQIVNIQIKRIEQLL
ADQKIKIELSPTAQAHLAEAGYDPVYGARPLKRAIQRELQNPIATKILENTFLEGDTILVDSDNDSLTFSKKALLTLPEV
QIVQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-104 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-106 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-106 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cri9333_4618 YP_007144908.1 ATP-dependent chaperone ClpB VFG2076 Protein 4e-117 42