Gene Information

Name : Cri9333_4441 (Cri9333_4441)
Accession : YP_007144734.1
Strain : Crinalium epipsammum PCC 9333
Genome accession: NC_019753
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5005031 - 5006404 bp
Length : 1374 bp
Strand : -
Note : PFAM: ThiC family; COGs: COG0422 Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: ana:all0982 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyrimidi

DNA sequence :
ATGCGTTCAGAATGGGTCGCGAAGCGTCGTGGGCAGGGTAATGTTACTCAAATGCACTATGCGCGTCAGGGTGTCATTAC
CGAAGAAATGCAGTATGTAGCTCAACGGGAAAACCTCCCAGTTGAGTTAATTCGTGATGAAGTTGCACGGGGACGGATGA
TTATCCCTGCCAATATCAATCACACCAACTTAGAACCGATGGCTATTGGTATCGCCTCTAAGTGTAAGGTAAATGCCAAT
ATTGGAGCCTCCCCCAACTCTTCCCATCTTCAGGAAGAAGTTGATAAGCTCAACCTGGCAGTTAAATACGGTGCTGACAC
CGTGATGGATTTGTCCACAGGTGGTGGCAACCTCGATGAAATCCGCACCGCAATCATCAACGCTTCCCCTGTACCCATTG
GCACTGTGCCTGTGTACCAAGCCCTAGAAAGCGTTCACGGCAATATTGAAAGTTTAACCCCCGATGACTTCCTGCATATC
ATCGAAAAACACGCTCAACAGGGTGTAGATTACCAAACTATCCACGCCGGAATTCTGATTGAACATCTACCGTTAGTAAG
AAATCGCCTTACGGGTATTGTTTCTCGCGGCGGCGGTATTCTAGCGCGGTGGATGCTGCATCACCACAAACAAAATCCTC
TATATACGCATTTCAAAGACATCGTTGAAATCTTCCAGAGATATGATGTTTCCTTCAGCTTAGGAGATTCATTGCGCCCT
GGTTGTACCCACGATGCTTCTGACGAAGCGCAACTAGCTGAACTCAAAACCCTTGGAAAACTAACCCGCAAAGCTTGGGA
AGATAACGTCCAAGTGATGGTTGAAGGGCCTGGTCACGTCCCGATGGATCAAATTGAGTTTAACGTCAAAAAGCAAATGG
AAGAGTGTTCTGAAGCACCTTTCTATGTTTTAGGGCCATTGGTAACAGATATTGCTCCAGGTTATGACCATATTACCTCA
GCAATTGGGGCTGCAATGGCTGGTTGGTATGGTACTGCGATGCTGTGCTATGTGACACCTAAAGAACACTTAGGCTTACC
AGATGCCGAAGACGTGCGGAATGGGTTAATTGCATATAAGATTGCTGCCCATGCTGCGGATATTGCCCGTCGTCGTCCAG
GTGCAAGAGATAGAGATGATGAACTTTCTCGCGCCCGTTATAATTTCGACTGGAACCGCCAGTTTGAATTATCCCTCGAC
CCCGAACGCGCTAAAGAATATCACGACGAAACATTACCAGCAGACATTTACAAAACTGCTGAATTCTGTTCAATGTGTGG
TCCTAAATTCTGTCCAATGCAGACTAAAGTTGATGCTGATGCGTTGACAGAATTAGAGAAGTTTTTGGCTAAGGAACCTG
TAGCTCAAGGTTAA

Protein sequence :
MRSEWVAKRRGQGNVTQMHYARQGVITEEMQYVAQRENLPVELIRDEVARGRMIIPANINHTNLEPMAIGIASKCKVNAN
IGASPNSSHLQEEVDKLNLAVKYGADTVMDLSTGGGNLDEIRTAIINASPVPIGTVPVYQALESVHGNIESLTPDDFLHI
IEKHAQQGVDYQTIHAGILIEHLPLVRNRLTGIVSRGGGILARWMLHHHKQNPLYTHFKDIVEIFQRYDVSFSLGDSLRP
GCTHDASDEAQLAELKTLGKLTRKAWEDNVQVMVEGPGHVPMDQIEFNVKKQMEECSEAPFYVLGPLVTDIAPGYDHITS
AIGAAMAGWYGTAMLCYVTPKEHLGLPDAEDVRNGLIAYKIAAHAADIARRRPGARDRDDELSRARYNFDWNRQFELSLD
PERAKEYHDETLPADIYKTAEFCSMCGPKFCPMQTKVDADALTELEKFLAKEPVAQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 3e-120 61
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 3e-120 61
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 3e-117 58