Gene Information

Name : Cri9333_3497 (Cri9333_3497)
Accession : YP_007143832.1
Strain : Crinalium epipsammum PCC 9333
Genome accession: NC_019753
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3916054 - 3917334 bp
Length : 1281 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrog

DNA sequence : 
TTGAGCGATCGCATTGCTATTATTGGTCTTGGTTACGTCGGCTTGCCCGTAGCTTTAGCATTTGCTAAAAACTTTTCAGG
TACTATCGGATTTGATATTAATTACGAAAAAGTTACCGCTCTTAAGCAGGGGATTGATACTACGGGCGAAATTCCGAGTG
ATGAATTAATTGCTACAACTCTCCAAATTACTTCCGATCCAGTAGATTTAAAAGCCGCTAACTTCTTTGTTGTTGCTGTT
CCTACCCCAATAGACCGTTATAATCGTCCTGATTTAACACCTCTAATTAAATCTTCCGAAACCATTGGTAAGGTACTACA
ACCTGGATCAGTAGTAGTATACGAGTCTACAGTATATCCTGGCGTAACCGAGGAAATATGTGGCCCAATATTAGCAAAAG
CATCTGGTTTAACTCAAGGTATTGATTTTAAGCTGGGTTACTCACCAGAAAGAATTAATCCGGGCGATAAGGAACATACT
ATAGAAAAAATTGTCAAAGTTGTTTCTGGGGAAGATGCAGAAACTTTAGAGCGAGTTGCCAAAGTTTACGGAACTATTAT
TGACGCAGGTGTACACCGCGCTCAATCTATTAAAGTTGCCGAAGCAGCTAAAGTTATCGAAAATACTCAGCGAGACTTAA
ATATTGCCTTAATGAATGAATTAGCAGTAATTTTTGATCGGTTGGGTATCCGCACTCATGATGTTTTAGCCGCAGCAAAA
ACAAAATGGAACTTTTTACCCTTCAACCCAGGACTTGTAGGTGGTCACTGTATCGGAGTTGATCCTTATTATCTCACGAC
TAAAGCACAACAACTAGGCTATCATCCTGAAGTTATCCTTGCTGGTCGTCGGATTAATGACAGCATGGGAACATACATTG
CTCAAAGACTAATTAAGCTGTTTGTTAAATCTAATTTACGTATTCAAGGCGCTAAAGTAGGCATTTTAGGGCTAACATTT
AAGGAAAATGTTCCTGACTTACGTAATAGCCGTGTACCTGATATTGTGGCAGAGTTAAGACAATTTGGGATTGAGCCATT
AGTACACGATTCTTTAGTTACTTCCGAGCAAGCACAACATGAATATGGTATACAGCTAACAGATTGGCAAGATTTTTCCG
ATTTAGATGGAATGATTCTTGCTGTTAGCCACCGTTTTTATCTTGATATGCCCCGCGAACAATTACTAGCTGGCATTAAA
ACTGGTGGGGTTCTGATGGATGTCAAATCCGCTTTTGATCCAGCTACACTTCCAGAAAATCTTACTTATTGGAGTTTGTA
G

Protein sequence : 
MSDRIAIIGLGYVGLPVALAFAKNFSGTIGFDINYEKVTALKQGIDTTGEIPSDELIATTLQITSDPVDLKAANFFVVAV
PTPIDRYNRPDLTPLIKSSETIGKVLQPGSVVVYESTVYPGVTEEICGPILAKASGLTQGIDFKLGYSPERINPGDKEHT
IEKIVKVVSGEDAETLERVAKVYGTIIDAGVHRAQSIKVAEAAKVIENTQRDLNIALMNELAVIFDRLGIRTHDVLAAAK
TKWNFLPFNPGLVGGHCIGVDPYYLTTKAQQLGYHPEVILAGRRINDSMGTYIAQRLIKLFVKSNLRIQGAKVGILGLTF
KENVPDLRNSRVPDIVAELRQFGIEPLVHDSLVTSEQAQHEYGIQLTDWQDFSDLDGMILAVSHRFYLDMPREQLLAGIK
TGGVLMDVKSAFDPATLPENLTYWSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-115 56
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 5e-101 55
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 5e-101 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cri9333_3497 YP_007143832.1 nucleotide sugar dehydrogenase VFG0431 Protein 2e-101 55