Gene Information

Name : Cri9333_2226 (Cri9333_2226)
Accession : YP_007142607.1
Strain : Crinalium epipsammum PCC 9333
Genome accession: NC_019753
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2527222 - 2529669 bp
Length : 2448 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit

DNA sequence :
ATGTTTGAAAGATTAACAGATAAAGCCGTTAAAGTAATCATTGTAGCTCAAGAAGAAACACGGCGTTTAGGGCATACTTT
AGTTGGCACTGAACAGATTTTGCTGGGGTTAATTGGAGAAGGAACTAGCGTTGCAGCTAAAATTTTAGTTGAGCGAGGTG
CAAATCTCCAAAAGGCACGCAAAGAAGTAGAAAAAATTATCGGTCGTGGTTCTCGATTTGTTCCAGAACAAATTCCTGTC
ACACCTAAAGTTAAGCGCATTTTTGACCAAGCTTTAATTGAATCGCAACAATTGGGGCATAATTATATTTCCCCCGAACA
TTTACTGTTAGGACTACTTAACGAAGGCGAAGGTGTTGCAACTAGAGTGTTGCAAAATCTAGGCGTTGACCTAAAGGAAC
TTCAATTAGCAGTTCTTAAACAACTGACAGTAGAAGCACCAGCAGAGGTTGGTACTACACGGCAGCGTTCCCAAAATAAA
ACCCCAATTTTAGATGAGTTTGGGACTGATTTGACAGAGTTAGCCGCAAAAGGCAAACTTGATCCTGTTGTGGGTAGAGA
GCGAGAAATTGAACGTGCTATCCAGATTTTAGGTCGGCGGACTAAGAATAACCCTGTATTAATAGGTGAACCTGGAGTTG
GTAAAACTGCGATCGCAGAAGGTCTAGCTCAACGTATCATTAACAAGAATGTCCCTGGTACTTTGGAAGATAAGCAAGTT
ATCAGCTTGGATATGGGTTCCTTAGTTGCAGGAACTAAATTTAGAGGTGAATTTGAAGAACGCCTCAAAGGAATTGTGGA
GGAAGTTCGCTCATCTGGGAATATTATCTTGGTAATTGATGAGCTTCACAACATTATCGGCACTGGGTCTGTGCAAGGTG
GTTTAGATGCTGCCAATATGCTCAAACCAGCTTTAGCGCGGGGTGAGTTGCAGTGCATCGGGATGACTACTCTGGATGAA
TACCGCAAGCATATTGAAAAGGATGCAGCTTTAGAACGTCGTTTCCAACCAATTAAGGTGGGTGAACCCAGTGTTGTAGA
AACGATAGAGATATTGTTTGGTTTGCGCGAAGCTTACGAGCAATTTCACAAAGTCAAAATTTCCGATGATGCTATTGATG
CAGCAGCTAAGTTATCAGATCAGTATATAAGCGATCGCTTCTTACCAGATAAAGCCATAGACTTAATTGATGAAGCTGGT
TCTCGTCTGCGCGTCCAGAATACTATGTCTCCTGCACATCGAGAATTAAAGCGGGAACTGCGTCAAGTTAGCAAAGCCAA
ACAAGAAGCAGTTCAAGTTCAAGATTTTGATCAAGCTGGGAAGTTGCGCGACAAAGAATTAGAACTTGAAGGGCAACTCA
AGAAAATGGCGACATCCCAAGACTCAGCCGATATCCCAGTGGTTGATGCTGAGAAAATCGCTGAAATTGTTGCTGTTTGG
ACTGGTGTACCTGTCAGCAAACTCACCGAATCTGAATCAGCAAAGTTGCTCGATTTAGAAGATACCTTACATCAGCGCCT
TATTGGTCAAGACCAAGCCGTTACCGCAGTATCTAAAGCTATACGTCGCGCACGAGTTGGATTAAAAAGTCCTAACCGAC
CAATCGCTAGTTTTATCTTCTCAGGTCCAACCGGAGTTGGCAAGACTGAATTAGCCAAAGCCTTAGCTGCTCATTTCTTC
GGTTCAGAAGAAGCGATGATTCGGGTGGATATGTCGGAATATATGGAAAGCCACACAGTTTCTAAACTAATTGGTTCTCC
TCCTGGGTTTGTCGGTTATGACGAAGGCGGACAATTAACAGAAGCAGTGCGTCGCCGTCCTTATTCTGTTATCCTATTCG
ACGAAATCGAAAAAGCGCATCCCGACGTATTTAATATGATGTTGCAAATGTTAGATGATGGTCGTCTAACTGATGCCCAA
GGTCGCACAGTAGACTTTAAGAATACCTTAATCATTCTGACATCTAATTTGGGTTCAAAAGTCATTGAAAAAGGCGGCAG
TGGTTTAGGTTTTGAATTTAGTGAAGACCAAGCTGAAGCTACTTATAACCGGATGCAGCAGCGAGTACAAGAAGAACTCA
AAGCTTATTTCCGTCCTGAATTTCTCAACCGTCTTGACGACATTATTGTTTTCCGTCAATTAACATTTGAGGAAGTAAGA
AGTATCGCAGGTATCATGTTGCGAGAAGTTGCTAGTCGTTTAACCGAACAGGAAATTAGTCTAGAAGTTACTGACAAGTT
TAAAGACCGAGTTGTAAAAGAAGGGTTTAATCCTAAGTTTGGTGCAAGGGAGTTGCGACGGGCAATTATGCGGTTGTTAG
AAGATAGTTTGGCGGAAGCAATGCTGAGTGGCACTGTTAATAGTGGTGATACTGCTGTTATTGATGTAGGTGAGGATGGT
GAGGTGGAAATTAAAAGGATGCAGCGACAAGAGTTAGTTATTGTTTAA

Protein sequence :
MFERLTDKAVKVIIVAQEETRRLGHTLVGTEQILLGLIGEGTSVAAKILVERGANLQKARKEVEKIIGRGSRFVPEQIPV
TPKVKRIFDQALIESQQLGHNYISPEHLLLGLLNEGEGVATRVLQNLGVDLKELQLAVLKQLTVEAPAEVGTTRQRSQNK
TPILDEFGTDLTELAAKGKLDPVVGREREIERAIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIINKNVPGTLEDKQV
ISLDMGSLVAGTKFRGEFEERLKGIVEEVRSSGNIILVIDELHNIIGTGSVQGGLDAANMLKPALARGELQCIGMTTLDE
YRKHIEKDAALERRFQPIKVGEPSVVETIEILFGLREAYEQFHKVKISDDAIDAAAKLSDQYISDRFLPDKAIDLIDEAG
SRLRVQNTMSPAHRELKRELRQVSKAKQEAVQVQDFDQAGKLRDKELELEGQLKKMATSQDSADIPVVDAEKIAEIVAVW
TGVPVSKLTESESAKLLDLEDTLHQRLIGQDQAVTAVSKAIRRARVGLKSPNRPIASFIFSGPTGVGKTELAKALAAHFF
GSEEAMIRVDMSEYMESHTVSKLIGSPPGFVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNMMLQMLDDGRLTDAQ
GRTVDFKNTLIILTSNLGSKVIEKGGSGLGFEFSEDQAEATYNRMQQRVQEELKAYFRPEFLNRLDDIIVFRQLTFEEVR
SIAGIMLREVASRLTEQEISLEVTDKFKDRVVKEGFNPKFGARELRRAIMRLLEDSLAEAMLSGTVNSGDTAVIDVGEDG
EVEIKRMQRQELVIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cri9333_2226 YP_007142607.1 ATPase VFG0079 Protein 0.0 54
Cri9333_2226 YP_007142607.1 ATPase VFG0080 Protein 2e-157 53