|
Name : Cri9333_0177 (Cri9333_0177) Accession : YP_007140686.1 Strain : Crinalium epipsammum PCC 9333 Genome accession: NC_019753 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 218536 - 221016 bp Length : 2481 bp Strand : + Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit DNA sequence : ATGTTTGAACGCTTTACAGAAAAAGCCATTAAGGTAATCATGCTGGCTCAGGAAGAAGCACGTCGCCTGGGTCATAATTT TGTCGGTACAGAGCAAATTCTCCTGGGTCTGATCGGGGAAGGAACTGGTGTAGCCGCCAAAGTTTTAAAATCTATGGGTG TCAATCTTAAAGATGCCCGAATTGAAGTAGAAAAAATTATAGGTCGAGGCTCTGGTTTCGTGGCGGTGGAAATTCCCTTC ACCCCAAGAGCCAAGCGCGTTCTAGAGTTATCCTTAGAAGAAGCACGTCAACTAGGGCATAACTACATTGGCACCGAACA CCTGCTTCTGGGGCTAATTCGAGAAGGGGAAGGCGTAGCTGCCAGAGTATTAGAAAATCTAGGCGTTGACCTTTCTAAGG TACGGACGCAAGTGATTCGGATGCTCGGCGAAACGGCAGAGGTAGGCGCTGGTGCGAGTAGCCAAGGTAGAACAAAGACT CCAACCCTGGACGAATTTGGCTCTAACCTCACCCAGATGGCAGCAGACGGTAAGCTTGACCCTGTGGTGGGACGGAGTAA AGAAATTGAACGGGTGATCCAAATTTTGGGTCGTCGTACTAAGAATAATCCAGTGTTGATTGGGGAACCAGGAGTTGGTA AAACTGCGATCGCAGAAGGTTTAGCCCAACGCATCGCTAACAACGATATTCCTGACATCCTAGAAGAAAAACGAGTCGTC ACCTTAGATATTGGTTTGTTAGTAGCTGGAACCAAATATCGCGGTGAATTTGAAGAACGACTCAAGAAAATTATGGATGA AATTCGTCAAGCTGGAAATGTCATTCTAGTAATTGACGAAGTACATACATTAATTGGTGCTGGTGCAGCAGAAGGCGCAA TTGATGCAGCCAACATTCTCAAACCAGCTTTAGCTAGAGGTGAGTTGCAGTGTATTGGCGCAACCACCCTGGATGAGTAC CGCAAGCATATTGAACGGGATGCTGCTTTAGAACGTCGCTTCCAGCCTGTAATGGTGGGTGAACCAACAGTTGATGAAAC TATTGAAATCCTGCACGGGTTGCGCGAACGTTACGAGCAACACCACAAGCTGAAGATTTCTGATCTCGCGTTAGAAGCAG CAGCGAAACTATCAGATCGTTATATTTCTGATCGCTTCTTACCAGATAAGGCAATTGACTTAGTTGATGAAGCTGGTTCG CGGGTGCGTTTGATTAACTCTCAGCTACCTGCGGCTGCGAAGGAATTAGATAAGGAACTGCGTAAGGTTCTTAAAGAAAA AGACGAAGCTGTAAGGTCGCAAGACTTTGATCGGGCTGGTGAATTGCGCGATCGCGAAATGGAAATCAAAGCCGAAATCC GTTCAATCGCTCAAACCAAGAAGTCAGATCCTAAGAGTAGCGATGAAGCTTCACCAGTAGTCACAGAAGAAGATATTGCT CAAATTGTCGCTTCTTGGACTGGTGTACCTGTCAACAAGCTGACGGAATCTGAATCCGAAAAACTGCTGCACATGGAAGA TACCCTCCACCAGCGTTTGATCGGTCAAGAAGACGCTGTTAAGGCAGTCTCCCGTGCTATTCGTCGCGCTCGTGTTGGTC TGAAAAACCCCAACAGACCGATTGCAAGCTTTATCTTCTCAGGTCCAACTGGGGTTGGTAAGACAGAACTTGCTAAATCT CTCGCGTCTTACTTCTTCGGTTCAGAAGAAGCAATGATTCGCTTGGATATGTCCGAATACATGGAGCGCCATACAGTTTC TAAGCTGATTGGTTCGCCTCCAGGTTATGTCGGTTACAACGAAGGCGGTCAGTTAACCGAAGCAGTGCGTCGTCGTCCTT ATACCGTGATCCTGTTCGATGAAATCGAAAAAGCTCACCCCGATGTCTTCAATATGTTGCTGCAAATCTTAGAAGATGGG CGGTTAACTGACGCAAAGGGTCGCACGGTAGACTTCAAGAATACCTTGCTGATTATGACTTCTAACATCGGTTCTAAGGT GATTGAAAAAGGTGGCGGCGGTCTTGGTTTCGAGTTCAGTGAAAATAAAACTGAATCTCAGTACAACCGGATTCGCTCTT TGGTCAACGAAGAACTCAAGAATTACTTCCGTCCAGAATTCCTCAATCGTCTTGACGAAATCATCGTCTTCCATCAACTA ACGAGAGATGAGGTGAAGGAAATCGCCGACATCATGCTCAAAGAGTTGTTCAAACGCTTAAATGATCAGGGAATGTCTTT GGAAGTAACCGAACGGTTTAAGGATCGTTTAGTACAAGAAGGTTACAGCCCTGCTTATGGTGCTAGACCACTGCGTAGAG CAATTATGCGTCTCTTGGAAGATGTGCTGGCTGAGGAAATCCTCTCTGGTCGCCTTAAAGATGGGAACGCAGCAGTTGTT GACGTTGGTGAAGATGGTCAAGTGAAGGTGGAGTTAGGTCAGAAACGAGAAGTACTACCACTTCCCCAAGCTGTTGAGTA A Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVGAGASSQGRTKT PTLDEFGSNLTQMAADGKLDPVVGRSKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEEKRVV TLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY RKHIERDAALERRFQPVMVGEPTVDETIEILHGLRERYEQHHKLKISDLALEAAAKLSDRYISDRFLPDKAIDLVDEAGS RVRLINSQLPAAAKELDKELRKVLKEKDEAVRSQDFDRAGELRDREMEIKAEIRSIAQTKKSDPKSSDEASPVVTEEDIA QIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKS LASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQILEDG RLTDAKGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSENKTESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFHQL TRDEVKEIADIMLKELFKRLNDQGMSLEVTERFKDRLVQEGYSPAYGARPLRRAIMRLLEDVLAEEILSGRLKDGNAAVV DVGEDGQVKVELGQKREVLPLPQAVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cri9333_0177 | YP_007140686.1 | ATPase | VFG0079 | Protein | 0.0 | 61 |
| Cri9333_0177 | YP_007140686.1 | ATPase | VFG0080 | Protein | 4e-156 | 53 |
