Gene Information

Name : Cal6303_5301 (Cal6303_5301)
Accession : YP_007140159.1
Strain : Calothrix sp. PCC 6303
Genome accession: NC_019751
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6383328 - 6385799 bp
Length : 2472 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit

DNA sequence :
ATGTTTGAACGCTTCACAGAAAAAGCCATTAAGGTGATCATGCTCGCTCAAGAAGAGGCTCGCCGTCTTGGGCACAATTT
CGTCGGTACCGAGCAGATCCTCTTGGGTCTAATCGGCGAAGGTACCGGTGTGGCGGCTAAGGTTCTCAAATCAATGGGTG
TCAATCTCAAAGATGCCCGCATTGAAGTTGAGAAAATTATCGGTAGAGGTTCAGGCTTTGTTGCCGTGGAAATTCCGTTT
ACGCCACGGGCAAAGCGAGTTCTAGAACTCTCTTTGGAAGAAGCTCGCCAGTTGGGACACAATTACATCGGCACCGAACA
CTTGTTGTTAGGCTTAATCCGTGAGGGTGAAGGCGTAGCAGCCAGAGTGCTAGAAAACTTAGGTGTTGACCTATCGAAGG
TCAGAACCCAGGTAATCAGGATGTTAGGTGAAACAGCAGAAGTGACACAGGGTGGTCCTTCTAGCCGCACCAAAACCCCC
ACTTTGGACGAATTCGGCTCGAATTTGACCCAAATGGCAATTGACGGCAAGCTCGACCCAGTAGTGGGACGTGCCAAAGA
GATTGAGCGGGTAATTCAGATATTGGGTCGTCGTACCAAAAACAACCCAGTATTGATTGGTGAACCAGGTGTTGGTAAAA
CTGCCATAGCAGAAGGACTAGCAACCCGGATTTCCACCAAGGATATCCCTGACATCCTCGAAGATAAGCGTGTCGTCACT
CTCGACATTGGTTTGCTAGTAGCTGGAACCAAATACCGAGGTGAATTTGAAGAACGTCTGAAGAAAATCATGGATGAGAT
TCGTCAGGCGGGAAATGTAATTTTAGTTATAGACGAGGTACATACCTTAATTGGTGCGGGTGCAGCCGAGGGTGCAATCG
ATGCGGCAAATATCCTCAAGCCTGCCTTGGCACGGGGTGAATTGCAATGTATTGGTGCCACCACCCTGGATGAATACCGC
AAGCACATCGAACGTGATGCTGCTTTGGAACGCCGTTTCCAACCAGTAATGGTGGGTGAACCTTCAGTAGACGAAACCAT
TGAAATTTTATATGGTTTGCGCGATCGCTATGAGCAACACCACAAGCTGAAGATATCAGACGAAGCTTTAGTTGCCGCAG
CGAAGTTATCAGACCGCTATATATCAGACCGTTTTCTCCCCGATAAAGCCATCGACTTAGTTGATGAAGCTGGTTCGCGG
GTACGTTTAATTAACTCCCAATTACCCCCCGCTGCCAAAGAACTAGACAAAGAACTACGTCAAATCCTCAAAGAAAAAGA
TGACGCAGTTCGCAGTCAAGACTTTGACCGTGCCGGAGAATTGCGCGATCGCGAAATGGAAATTAAAGCCGAAATTCGCA
CCATCGCGCAAAACAAAACCAACGCCAAAGGTAACGAAGGTGAAGAACCAGTAGTTACTGAGGAAGACATCGCTCACATC
GTGGCTTCCTGGACAGGTGTCCCCGTCAACAAGCTAACCGAATCCGAATCGGAAAAGCTGTTACACATGGAAGACACCCT
ACACCAGCGCTTGATCGGTCAGGAAGACGCAGTTAAAGCAGTCTCACGAGCCATCCGTCGCGCTCGTGTTGGCTTGAAGA
ATCCTAACCGACCCATCGCCAGCTTTATCTTCTCTGGTCCAACCGGGGTAGGTAAAACTGAATTGGCAAAATCCTTAGCC
TCCTACTTCTTCGGTTCCGAAGAAGCTATGATTCGCCTGGACATGTCTGAGTACATGGAGCGTCACACAGTCAGTAAATT
GATTGGTTCACCTCCAGGTTATGTAGGATACAACGAAGGTGGTCAGCTAACGGAAGCAGTACGCCGTAGACCATACACAG
TAGTGCTTTTCGACGAAATCGAAAAAGCTCACCCTGATGTATTCAATATGCTACTGCAAATCCTAGAAGACGGTAGACTT
ACGGATGCCAAAGGTCGCACAGTAGACTTCAAAAACACCTTACTCATCTTGACCTCCAACATCGGTTCTAAAGTCATTGA
AAAAGGTGGTGGTGGTATCGGATTCGAGTTTGCTGAAGATCAAACAGATTCTCAGTACAACCGGATTAAATTCTTGGTGA
ACGAAGAACTGAAGAACTACTTCCGTCCTGAGTTCCTCAACCGTCTGGATGAAATCATCGTCTTCCGTCAGTTGAACAAA
GCCGAAGTTACCGAAATCGCCGACATCATGCTCAAAGAAGTCTTTGGTCGTCTTACCGAAAAAGGTATTACCTTGGAAGT
CAGCGACAGCTTCAAAGACCGTTTGATTCAGGAAGGTTACAGTCCCAGTTATGGTGCTAGACCCCTGCGTCGAGCGATTA
TGCGCCTGTTAGAAGACAGTTTAGCTGAGGAAATCCTTTCTGGTAGAGTCAAAGACGGTGACATTGCCGTAGTTGATATC
GACGAGAATGGAGCAGTAATTGTCCGTCCTGGTGAACGTCGAGAACTATTAACACCAGGAGTCGAATCATAA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVTQGGPSSRTKTP
TLDEFGSNLTQMAIDGKLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLATRISTKDIPDILEDKRVVT
LDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR
KHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQHHKLKISDEALVAAAKLSDRYISDRFLPDKAIDLVDEAGSR
VRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFDRAGELRDREMEIKAEIRTIAQNKTNAKGNEGEEPVVTEEDIAHI
VASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLA
SYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRL
TDAKGRTVDFKNTLLILTSNIGSKVIEKGGGGIGFEFAEDQTDSQYNRIKFLVNEELKNYFRPEFLNRLDEIIVFRQLNK
AEVTEIADIMLKEVFGRLTEKGITLEVSDSFKDRLIQEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRVKDGDIAVVDI
DENGAVIVRPGERRELLTPGVES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal6303_5301 YP_007140159.1 ATPase VFG0079 Protein 0.0 59
Cal6303_5301 YP_007140159.1 ATPase VFG0080 Protein 1e-153 55