Gene Information

Name : Cal6303_5206 (Cal6303_5206)
Accession : YP_007140064.1
Strain : Calothrix sp. PCC 6303
Genome accession: NC_019751
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6258899 - 6259573 bp
Length : 675 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ava:Ava_0615 t

DNA sequence :
ATGAAATCACATATTTTACTAGTTGAAGATGAGATAAAACTGGCTCGACTCGTTGAGTCTGAGTTGAGCTATGAAGGCTA
TCAAGTAACTGTGGCGTATGATGGATTGGCTGGACTGAATAATGCACGGCAGTTAAAGCCAGATTTGTTGATTATCGATT
GGAAATTACCAAATTTATCTGGATTAGAAATTTGTCGTCGCTTGCGAATTACAGGCGACCAAGTACCGATAGTATTATTA
ACAGCGAAAGATGAAATAAGCGATCGCGTTGCTGGATTAGATGCTGGTGCAGATGACTACATCCTCAAACCGTTGAGGGG
AGATGACTTGATGTCACGGGTTCGTGCCCATTTGCGGAAACAACCAAAACTCGATCCGGACTTACTAGAATTTGAAGATT
TAACCTTGAATAAACGCACTAAGCACGTACACCGGGGAGTACGTTCCATTGATTTAACCGCTAAAGAATTTGATTTATTG
GAATATTTGATTGCCCACCCTCGACAAGTTATCACACGCGATCGCATTTTAGAATCGGTGTGGGGTTATGAGTTCATGGG
AGACTCTAATATCATCGAAGTTTATATCCGCTACCTACGTCTGAAACTAGAGGCTGAAAATGAAAAACGCCTCATTCAAA
CGGTGCGGGGAGTTGGCTACGTTTTGCGTGAATAA

Protein sequence :
MKSHILLVEDEIKLARLVESELSYEGYQVTVAYDGLAGLNNARQLKPDLLIIDWKLPNLSGLEICRRLRITGDQVPIVLL
TAKDEISDRVAGLDAGADDYILKPLRGDDLMSRVRAHLRKQPKLDPDLLEFEDLTLNKRTKHVHRGVRSIDLTAKEFDLL
EYLIAHPRQVITRDRILESVWGYEFMGDSNIIEVYIRYLRLKLEAENEKRLIQTVRGVGYVLRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-32 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 1e-40 48
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 7e-46 47
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 7e-46 47
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 7e-46 47
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 7e-46 47
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 7e-46 47
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 7e-46 47
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 7e-46 47
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 7e-46 47
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 1e-38 44
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 7e-38 43
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 2e-38 42
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 2e-38 42
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 2e-38 42
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 4e-38 42
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 2e-38 42
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 2e-38 42
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 2e-38 42
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 2e-38 42
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 2e-38 42
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 2e-38 42
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator BAC0308 Protein 7e-35 42
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator BAC0347 Protein 6e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator VFG1390 Protein 8e-53 52
Cal6303_5206 YP_007140064.1 winged helix family two component transcriptional regulator VFG0596 Protein 1e-32 42