Gene Information

Name : Cal6303_5001 (Cal6303_5001)
Accession : YP_007139865.1
Strain : Calothrix sp. PCC 6303
Genome accession: NC_019751
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.3
Position : 6026481 - 6028493 bp
Length : 2013 bp
Strand : +
Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; COGs: COG0021 Transketolase; InterPro IPR005474:IPR005475:IPR005476:IPR00547

DNA sequence :
ATGGCTGTTGCGACCCAAACCCTTGAAGAACTTTGTATTAACTCGATCCGCTTCTTAGCAATCGATGCTGTGGAAAAAGC
AAAATCTGGACACCCAGGTTTGCCAATGGGTGCCGCGCCAATGGCGTTTGTACTTTGGGACAAATTCATGCGAATGAACC
CCAAAAACCCAAAATGGTTCAACCGCGATCGCTTTGTGCTTTCCGCTGGTCACGGCTCAATGTTACAGTATGCCCTACTG
CATTTAGCAGGCTATGACAGTGTGACAATTGAAGGCATTAAACAATTCCGGCAGTGGGGATCTGAAACCCCCGGACACCC
AGAAAACTTTGAAACCGCTGGTGTGGAAGTCACCACAGGACCTTTGGGACAAGGTATTGCCAACGCTGTTGGTTTAGCAA
TGGCTGAAGCACATCTTGCCGCAAAATTCAATAAGCCTGATGCCACAATTGTTGACCACTACACCTACGTAATTTTAGGT
GACGGTTGTAACATGGAAGGTATTTCGGGTGAAGCCTGTTCTTTCGCTGGACACCTGGGATTAGGAAAACTCATCGCCCT
CTATGACGATAACCACATCTCCATCGATGGTTCTACCGATGTAGCCTTTACCGAAGACGTTTCCAAGCGGTTTGAAGCCT
ACGGTTGGCACGTTCTTCATGTCGAAGATGGTAACAATGACTTGGCTGCAATTGAAAGCGCGATCGCAGAAGCTAAAAAA
GTCACCGACAAACCCAGCATGATCAAGGTGACAACCACCATCGGTTATGGTTCTCCCAACAAAGCTAACACCGCAGGAGT
TCACGGTGCAGCATTGGGTGGCGATGAAATTGAACTCACCCGCAACAACTTAAATTGGCAATACCCTCCTTTTGAACTAC
CACCAGATGCCGTCAACCACATGCGGAAGGCAGTGGAACGTGGTGCAACAGCAGAAGCTGAATGGAATCAAGCCCTCGCT
GAATACACAGCAAAATATCCCCAAGAAGCAGCAGAATTTGCCCGCTTCGTCAGTGGTAAACTCCCCGATGGTTGGGATAA
AGTCCTCCCCACCTACACCCCCGCAGACAAAGCACTACCCACCCGTAAACATTCGGAAACATGCCTCAACAAATTGGCGC
AAGTTCTCCCCGAATTAATTGGTGGTTCAGCCGACTTAACCCACTCCAACCTCACCGAAATCAAAGGCTTTGGTGATTTC
CAAAAGGGACAGTACGCAAACCGTAACGTTCACTTCGGTGTTCGGGAACATGGTATGGGTGCAATTTGCAACGGGATGGC
GCTGCATGGTTCCGGATTAATTCCCTACGGTGCAACCTTCCTAATTTTCACCGACTACATGCGGGCAGCAATTCGCCTCT
CAGCTTTGTCCCTCGCTGGTTCAATTTGGGTGATGACTCACGACTCCATCGGACAAGGTGAAGACGGTCCCACCCACCAA
CCAATCGAAACCCTCGCTTCTTTGCGGGCAATTCCTAACCTCACAGTGATTCGTCCTGCTGATGGAACCGAAACCTCTGG
TGCTTACAAAGTTGCCATTGAAAGCTCCAAAGCAGGCAACCCCACCCTGTTAGCATTCTCCCGCCAAAACCTACCTAACT
TAGCAGGTTCATCAATTGAAGGTGTTACAAAAGGTGGATATATCTTAGTTGATAGCCAAGGTACACCCGACATTATCTTA
ATTGGTACAGGTTCCGAAGTTAGCCTTTGTGTAACTGCTGCCGAAAAACTTACCGCCGAAGGTAAGAAAGTACGCGTAGT
TTCTATGCCATCCACCGATTTATTCGATGCCCAAGATGCAGCTTACAGAGAATCAGTATTACCAAAAGCTGTCACCAAGC
GCGTATCAGTGGAAGCGGCTTGCAGCTTCGGTTGGCACAAGTATATTGGCACTGAAGGTGTAGCAGTTAGCATCGACAGA
TTTGGTGCTTCTGCTCCTGGTAATATTTGCTTAGAGAAGTTCGGTTTCAGTGTTGAAAACGTATTTGCAACTGCTAAGAC
ACTATTAGGTTAG

Protein sequence :
MAVATQTLEELCINSIRFLAIDAVEKAKSGHPGLPMGAAPMAFVLWDKFMRMNPKNPKWFNRDRFVLSAGHGSMLQYALL
HLAGYDSVTIEGIKQFRQWGSETPGHPENFETAGVEVTTGPLGQGIANAVGLAMAEAHLAAKFNKPDATIVDHYTYVILG
DGCNMEGISGEACSFAGHLGLGKLIALYDDNHISIDGSTDVAFTEDVSKRFEAYGWHVLHVEDGNNDLAAIESAIAEAKK
VTDKPSMIKVTTTIGYGSPNKANTAGVHGAALGGDEIELTRNNLNWQYPPFELPPDAVNHMRKAVERGATAEAEWNQALA
EYTAKYPQEAAEFARFVSGKLPDGWDKVLPTYTPADKALPTRKHSETCLNKLAQVLPELIGGSADLTHSNLTEIKGFGDF
QKGQYANRNVHFGVREHGMGAICNGMALHGSGLIPYGATFLIFTDYMRAAIRLSALSLAGSIWVMTHDSIGQGEDGPTHQ
PIETLASLRAIPNLTVIRPADGTETSGAYKVAIESSKAGNPTLLAFSRQNLPNLAGSSIEGVTKGGYILVDSQGTPDIIL
IGTGSEVSLCVTAAEKLTAEGKKVRVVSMPSTDLFDAQDAAYRESVLPKAVTKRVSVEAACSFGWHKYIGTEGVAVSIDR
FGASAPGNICLEKFGFSVENVFATAKTLLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 2e-152 55
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-151 53