Gene Information

Name : Cal6303_4839 (Cal6303_4839)
Accession : YP_007139709.1
Strain : Calothrix sp. PCC 6303
Genome accession: NC_019751
Putative virulence/resistance : Unknown
Product : RNAse PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 5830914 - 5831657 bp
Length : 744 bp
Strand : +
Note : PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; COGs: COG0689 RNase PH; HAMAP: Ribonuclease phosphorolytic, bacterial-type; InterPro IPR001247:IPR015847:IPR002381; KEGG: ava:Ava_2671 ribonuclease P

DNA sequence :
ATGACTTGGCAACGTCCAGATGGTCGGCAACCTTACCAATTACGTCCTGTAAACTTCCAGACAGATTTTACTTGTTTTGC
ACCTGGTTCAGTTTTGGCTCAATGCGGTGAAACTCGTGTCCTTTGTACTGTGAGCATAGCTAAAGGTGTACCGAAGTTTC
TGGAGGGTAGCGGTAAAGGTTGGTTAACTGCTGAGTATCGCATGTTGCCATCTGCCACTCTCCAGCGCAAGCAAAGGGAA
GATTTGAAGTTATCGGGACGCACCCAGGAGATTCAACGTTTAATTGGACGCAGTTTAAGATCTGTAATTGATTTTGACGC
GTTGGGTGAAAATACTTTTACAGTTGATGCTGATGTGTTGCAAGCTGATGCTGGAACCAGAACAACTGCGATTACTGGTG
GTTTTGTCGCTTTAGCTTGTGCTATTTCCAAATTAGTACAGATGGGATCGTTGACGCGATCGCCTATCATCGGACAAGTA
GCTGCTACGTCGGTTGGTTTACTAGGTGGTGAAGCATTCCTAGATTTAAACTATGTTGAAGATGTTGCTGCAGAAGTTGA
TTTTAATGTGGTGATGAATCAAAATCTTGGCATTATTGAAGTTCAAGGGACAGCAGAAGAAGGTTATTTTAGCCGACAAC
AGTTAAATCAGTTGTTGGATTTTTCAGAAAAAGGTATTCAGCAGTTATTAGCATCTCAACGTCAAGCAATTCCGAATTGG
AATGATATTTATATGGGTGATTAG

Protein sequence :
MTWQRPDGRQPYQLRPVNFQTDFTCFAPGSVLAQCGETRVLCTVSIAKGVPKFLEGSGKGWLTAEYRMLPSATLQRKQRE
DLKLSGRTQEIQRLIGRSLRSVIDFDALGENTFTVDADVLQADAGTRTTAITGGFVALACAISKLVQMGSLTRSPIIGQV
AATSVGLLGGEAFLDLNYVEDVAAEVDFNVVMNQNLGIIEVQGTAEEGYFSRQQLNQLLDFSEKGIQQLLASQRQAIPNW
NDIYMGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-50 52