Gene Information

Name : Cal6303_4687 (Cal6303_4687)
Accession : YP_007139559.1
Strain : Calothrix sp. PCC 6303
Genome accession: NC_019751
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5644697 - 5647315 bp
Length : 2619 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAACCTACTAATCCTAACCAATTTACCGAAAAAGCCTGGGAAGCGATCGCGCAAACTCCCGAAACCGCTAAACAACA
TAATCAACAGCAAATTGAAAGTGAACACTTGATGAAGTCTTTGCTGGAACAGGATGGTTTAGCTGGGGCTATTTTTACGA
AAGCGGGTGTGAATCTCCAAAAACTCCGCGACAAAACAGATCAATTCATCCAAAGACAACCAAAGGTATCTGGTAGTAGC
ACCTCTGTTTATTTGGGTCGCAGTTTAGATACACTTTTAGATCGGGCGGATGCTGGACGTAAAGACTTTGGTGATGAGTA
TATTTCTGTTGAGCATCTATTGCTGGCATACTCAAAAGATGACCGTTTTGGCAAGGGTTTATTTCAAGAATTTGGATTAA
ACGAAAATAAGCTTAAAGATATTATTAAACAAATTCGGGGGAGTCAAAAAGTGACTGATCAAAGTCCAGAAGGAAAATAT
GATGCACTGGAAAAATATGGGCGTGATTTAACAGAGGCTGCCCGCAAAGGTAAACTAGATCCAGTAATTGGACGGGATGA
TGAGATTCGTCGCACTGTGCAGATTCTTTCCCGACGGACTAAGAATAATCCGGTGTTGATTGGAGAACCTGGTGTGGGTA
AAACTGCCATTGCTGAAGGTTTAGCACAACGGATTATTGCTGGAGATGTCCCCCAATCCCTCAAGGATCGACAATTAATT
AGTTTGGATATGGGTGCTTTGATTGCAGGTGCCAAATTCCGGGGTGAATTTGAAGAACGTTTGAAAGCAGTTCTGAAGGA
AGTGACGGACTCCAACGGGAATATAGTTTTATTTATTGATGAGATTCATACCGTTGTGGGTGCGGGTGCTACCCAAGGGG
CAATGGATGCCGGGAACTTACTCAAGCCGATGTTAGCGCGGGGTGAGTTGCGCTGTATTGGGGCAACAACTTTGGATGAG
TATCGGAAGTATATTGAGAAGGATGCAGCCTTAGAACGGCGTTTTCAACAGGTATATGTAGATCAACCCAGTGTTGAGGA
CACCATTTCGATTTTACGGGGTTTGAAAGAGCGTTATGAAGTTCACCACGGGGTGAGAATCGCTGATAATTCCTTGGTAG
CTGCCGCTACATTATCTAGTAGATATATTTCCGATCGCTTCCTCCCCGATAAAGCGATAGATTTGGTAGATGAAGCGGCT
GCGCGGTTGAAAATGGAAATTACCTCCAAACCAGAGGAATTAGACGAAATCGATCGCAAGATTCTGCAACTGGAAATGGA
GAAGCTATCATTACAAAAAGAGAGTGATCCAGCATCACGCGATCGCTTGGAAAGATTAGAGAAGGAATTGGCTGATTTAA
AAGAAGAACAGCGTACCCTCAGCACCCAATGGCAATCGGAAAAAGGTGTAATTACCAAGATTCAATCGGTTAAAGAAGAA
ATCGATCGAATGAATATCGAAATTCAACAAGCTGAACGCAATTATGACCTGAATCGGGCGGCTGAGTTGAAATACGGCAA
ATTAACCGATTTACATCGCAAATTGGAAACAGCCGAAGGTGAACTGGCACAAGCACAGCGCAGTGGTAAATCTTTACTGC
GGGAAGAAGTTACCGAAGCTGACATTGCCGAAGTCATTTCCAAGTGGACAGGTATCCCCATCAGCAAGTTGGTGGAATCG
GAAAAAGAAAAGCTTCTTCACCTGGAAGATGAACTACATCAACGTGTGATTGGGCAGAATGAAGCAGTCACAGCAGTTGC
CGACGCGATTCAACGTTCCCGTGCAGGACTTGCCGATCCTAATCGTCCCATAGCTAGCTTTATTTTCCTTGGTCCCACAG
GTGTTGGTAAAACCGAATTAGCTAAGGCTTTAGCAGCCTATCTATTTGATACTGATGAGGCGATGGTACGCATTGATATG
TCAGAGTATATGGAGAAACACGCAGTTTCCCGCCTGATTGGTGCGCCTCCTGGGTACGTAGGTTATGACGAGGGTGGGCA
ACTTACCGAAGCAATTCGCCGCCGTCCCTACACTGTAGTGCTATTCGATGAGATCGAAAAAGCACACCCAGATGTGTTTA
ATATTTTCCTGCAAATTCTGGATGATGGACGTGTCACCGATGCCCAAGGACGCACAATTGACTTTAAAAATACCATCATC
ATTATGACTAGTAATATTGGTTCCCAATACATCCTAGATGTAGCTGGGGATGATTCCAATTATGATGATATGCGCTTTAG
AGTCACCGAAGCCATGAGAAACGCCTTCCGTCCCGAATTCCTCAACCGGGTAGATGAGCAAATTATCTTCCACACCCTGC
AAAAATCAGAACTACGTAATATTGTCCAATTGCAGATAAATCGGTTAAGAAATCGATTAAGCGATCGCAAAATGTCTCTA
AAGGTATCTGACACAGCACTTGACTTTTTAGCCGAAGTCGGGTACGACCCCGTATATGGTGCGCGTCCCCTCAAACGTGC
TATCCAACGGGAACTAGAAACCCAAATTGCTAAACGCATCCTTCGCGGAGAATTTAGCGATGGTAACACCATCTTTGTGG
ATGTGGAAAATGAGCGGCTTTCCTTTACTCCGTTACCCGCTCAATTAGTCACAACTTAG

Protein sequence :
MQPTNPNQFTEKAWEAIAQTPETAKQHNQQQIESEHLMKSLLEQDGLAGAIFTKAGVNLQKLRDKTDQFIQRQPKVSGSS
TSVYLGRSLDTLLDRADAGRKDFGDEYISVEHLLLAYSKDDRFGKGLFQEFGLNENKLKDIIKQIRGSQKVTDQSPEGKY
DALEKYGRDLTEAARKGKLDPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIAGDVPQSLKDRQLI
SLDMGALIAGAKFRGEFEERLKAVLKEVTDSNGNIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDE
YRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKERYEVHHGVRIADNSLVAAATLSSRYISDRFLPDKAIDLVDEAA
ARLKMEITSKPEELDEIDRKILQLEMEKLSLQKESDPASRDRLERLEKELADLKEEQRTLSTQWQSEKGVITKIQSVKEE
IDRMNIEIQQAERNYDLNRAAELKYGKLTDLHRKLETAEGELAQAQRSGKSLLREEVTEADIAEVISKWTGIPISKLVES
EKEKLLHLEDELHQRVIGQNEAVTAVADAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYLFDTDEAMVRIDM
SEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAIRRRPYTVVLFDEIEKAHPDVFNIFLQILDDGRVTDAQGRTIDFKNTII
IMTSNIGSQYILDVAGDDSNYDDMRFRVTEAMRNAFRPEFLNRVDEQIIFHTLQKSELRNIVQLQINRLRNRLSDRKMSL
KVSDTALDFLAEVGYDPVYGARPLKRAIQRELETQIAKRILRGEFSDGNTIFVDVENERLSFTPLPAQLVTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-105 41
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-106 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-106 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal6303_4687 YP_007139559.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-112 44
Cal6303_4687 YP_007139559.1 ATP-dependent chaperone ClpB VFG2076 Protein 9e-120 42