Gene Information

Name : Cal6303_4587 (Cal6303_4587)
Accession : YP_007139459.1
Strain : Calothrix sp. PCC 6303
Genome accession: NC_019751
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5520977 - 5522035 bp
Length : 1059 bp
Strand : +
Note : PFAM: Periplasmic solute binding protein family; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: cyn:Cyan7425_3262 periplasmic solute binding protein; PFAM: ABC transporter metal-binding l

DNA sequence : 
ATGAAAACGAATATCAATACCTCAGAGGTGCGGGTACAAAAATATGTATCCTCAGCATCCGCTAATTCTGACAATATTTT
AAAGAACATTTTCAAATATTTCCGTACTTCCACGCTTGTAACCGCAAAGTCCTCATTAATCATCGGAATTATACTGCTGG
TATCTGGGCTAGCCGGGTGCAATTCCACACCCAAAACCGAACCAGAAACAACGAAAGTCACAGATACCGCAAAAAAAGAT
AAAAAAGTAATTTTAACTACCTTCACAGTCCTCGCTGACATGACAAAAAATGTCGCTGGTGACAAAGCAATTGTAGAATC
AATAGTTAAGCCAGGAGCCGAAATCCACGGATACGAACCCACACCTAGCGATTTAGTCAGAGGTAAAAAAGCCGATCTGA
TTCTTGACAATGGGCTAAATTTAGAACGTTGGGCAGAAAGATTCTATAACAATATTCCCAAGGTTCCCCGTGTAACTTTA
AGTACAGGTATAGAGCCTGTAGAAATCGGTGAGGATGCCTACAAAGGCAAACCCAATCCCCATGCGTGGATGTCGCCAAA
AAATGCTTTGATATATGTAGAGAATATTCGCAAAGCTCTAGTAAATTTAGATCCTATAAATGCCAATACATATAACACAA
ATGCGGCTAATTATAGCCAAAAAATTCAAGCAATTGACCAGCGACTAAAAACATCTGTGTCAATAATTCCAGTGGAAAAA
CGTTATATGGTTAGTTGCGAAGGAGCATTTTCTTATGTCACCCGTGATTATGGTTTAAAAGAAGTCTATCTATGGGCAGT
TAATTCTGAGCAACAAGCTACTCCTAGACAGATGGAAAAGGTAATCCAAACTGTGAAAATAAATAAAATACCTGCCGTAT
TTTGTGAAAGTACAGTTAACGACAAAGCACAAAGAGAAGTTGCTAATGCCACGGGGGCAAAATTTGGGGGAGTTTTCTAT
GTAGATTCTCTATCAACAGATAATGGTGCAGCACCAACTTATCTAAAATTAATTGAATATAATCTGAATATATTGATTCA
AGGTTTACAAAAAAATTAG

Protein sequence : 
MKTNINTSEVRVQKYVSSASANSDNILKNIFKYFRTSTLVTAKSSLIIGIILLVSGLAGCNSTPKTEPETTKVTDTAKKD
KKVILTTFTVLADMTKNVAGDKAIVESIVKPGAEIHGYEPTPSDLVRGKKADLILDNGLNLERWAERFYNNIPKVPRVTL
STGIEPVEIGEDAYKGKPNPHAWMSPKNALIYVENIRKALVNLDPINANTYNTNAANYSQKIQAIDQRLKTSVSIIPVEK
RYMVSCEGAFSYVTRDYGLKEVYLWAVNSEQQATPRQMEKVIQTVKINKIPAVFCESTVNDKAQREVANATGAKFGGVFY
VDSLSTDNGAAPTYLKLIEYNLNILIQGLQKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-72 56
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-72 56
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-72 56
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-72 56
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 8e-73 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal6303_4587 YP_007139459.1 periplasmic solute binding protein BAC0349 Protein 5e-73 56
Cal6303_4587 YP_007139459.1 periplasmic solute binding protein BAC0439 Protein 2e-72 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal6303_4587 YP_007139459.1 periplasmic solute binding protein VFG0525 Protein 5e-73 56