Gene Information

Name : Cal6303_3790 (Cal6303_3790)
Accession : YP_007138683.1
Strain : Calothrix sp. PCC 6303
Genome accession: NC_019751
Putative virulence/resistance : Virulence
Product : urease
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.5
Position : 4498483 - 4500189 bp
Length : 1707 bp
Strand : +
Note : PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit; COGs: COG0804 Urea amidohydrolase (urease) alpha subunit; HAMAP: Urease, alpha subunit; InterPro IPR011612:IPR006680:IPR005848; KEGG: ana:alr3670 urease

DNA sequence :
ATGCCTTACAGAATGTCCCGTCGTGCTTACGCTGAGACTTATGGTCCCACTGTGGGAGATAGAGTTAGACTTGCAGACAC
CGAATTATTTATCGAAGTAGAACAGGATTTCACAACCTATGGTGATGAAGTCAAATTTGGTGGTGGTAAAGTCATCCGCG
ATGGGATGGGACAATCGCCGATTTCCAATGCTGATGGTGCGGTGGATGTGGTGATTACCAATGCTTTGATCCTCGATTGG
TGGGGAATTGTCAAAGCTGATATTGGCATCAAAGATGGGAAAATACACAAAATTGGGAAAGCTGGAAATCCCTATATTCA
AGACAATATAGATATTATTATTGGTCCGGGGACAGAAGCGATCGCATGTGAAGGAATGATCCTAACGGCTGGTGGTATAG
ATAGCCATATCCATTTTATTTGTCCCCAACAAATTGAAGTAGCGATCGCATCGGGAATTACAACCATGATTGGTGGGGGT
ACGGGTCCGGCGACTGGTACAAATGCTACAACTTGTACACCGGGTGTGTGGAATATGTACCGGATGCTGCAAGCTGCTGA
TGCTTTCCCGGTGAATTTGGGTTTTTTGGGTAAAGGTAACAGTAGTCAACCCCAGGGACTAATTGAACAAATTAATGCGG
GGGCAATGGGGTTAAAGTTACATGAGGATTGGGGAACAACTCCAGCGACAATTGATACTTGTTTGACTGTTGCCGATGAG
TTTGATGTGCAGGTGGCAATTCACACGGATACCCTGAATGAAGCGGGGTTTGTGGAAGAAACCATTGCCGCTTTCAAAAA
TCGCGTTATCCACACCTACCATACAGAGGGTGCAGGGGGAGGACATGCACCCGATATTATCAAAGTTTGCGGGGAACCAA
ATGTTTTACCCTCTTCTACTAATCCTACCCGTCCCTACACGGTGAATACCCTGGATGAACACCTGGATATGTTGATGGTA
TGTCACCACCTAGATGCGGATATTCCCGAAGATGTGGCTTTTGCTGAATCCCGGATTCGTCGAGAAACAATCGCTGCTGA
GGATATTTTGCATGATTTAGGCGCTTTTAGTATGATTTCTTCCGATTCCCAAGCCATGGGAAGGGTGGGAGAGGTAATCA
TTCGCACTTGGCAAACTGGACATAAAATGAAGGTACAGCGGGGAAGCTTAACGGGGGATGGGCAAGCTGATAACCATCGG
GCAAAAAGATACGTTGCTAAATATACAATAAATCCGGCAATTGCTCACGGTATTTCCCAGTATGTAGGTTCAGTGGAAGA
AGGAAAACTGGCTGATTTATGTTTGTGGAAACCCGCTTTTTTTGGTGTGAAAGCAGAAATGGTAATTAAGGGGGGAATGA
TTGCCTGGTCACAAATGGGTGATGCCAACGCCAGTATTCCCACACCCCAACCTGTGCATATGCGTCCGATGTTTGGTAGC
TTTTCAGGTGCTTGTCATGCGACTTCCTTGACATTTCTCTCCCAAGCTGCATTAGAAAGGGAAATACCGCAGCAACTGGG
TTTGAAAAAAAGTGCGATCGCTGTTTCGGGAATTCGCAGTTTAACTAAGCGGGATATGAAGTTAAATGATGCTATGCCCC
ACATCGAAGTTGATGCCGAAACCTACGAAGTTCGGGCAGATGGTGAGTTACTAACCTGCGAACCTGCAACAATTTTACCA
ATGGCACAACGTTATTTCCTATTTTGA

Protein sequence :
MPYRMSRRAYAETYGPTVGDRVRLADTELFIEVEQDFTTYGDEVKFGGGKVIRDGMGQSPISNADGAVDVVITNALILDW
WGIVKADIGIKDGKIHKIGKAGNPYIQDNIDIIIGPGTEAIACEGMILTAGGIDSHIHFICPQQIEVAIASGITTMIGGG
TGPATGTNATTCTPGVWNMYRMLQAADAFPVNLGFLGKGNSSQPQGLIEQINAGAMGLKLHEDWGTTPATIDTCLTVADE
FDVQVAIHTDTLNEAGFVEETIAAFKNRVIHTYHTEGAGGGHAPDIIKVCGEPNVLPSSTNPTRPYTVNTLDEHLDMLMV
CHHLDADIPEDVAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVIIRTWQTGHKMKVQRGSLTGDGQADNHR
AKRYVAKYTINPAIAHGISQYVGSVEEGKLADLCLWKPAFFGVKAEMVIKGGMIAWSQMGDANASIPTPQPVHMRPMFGS
FSGACHATSLTFLSQAALEREIPQQLGLKKSAIAVSGIRSLTKRDMKLNDAMPHIEVDAETYEVRADGELLTCEPATILP
MAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 2e-167 69
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 2e-167 69
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 8e-163 66
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 5e-164 66
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 5e-164 66
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 5e-164 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cal6303_3790 YP_007138683.1 urease VFG0270 Protein 8e-149 63