Gene Information

Name : Cal6303_1563 (Cal6303_1563)
Accession : YP_007136578.1
Strain : Calothrix sp. PCC 6303
Genome accession: NC_019751
Putative virulence/resistance : Unknown
Product : transposase Tn3 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1835406 - 1838411 bp
Length : 3006 bp
Strand : -
Note : PFAM: Transposase; COGs: COG4644 Transposase and inactivated derivatives TnpA family; InterPro IPR002513; KEGG: zmn:Za10_1867 transposase Tn3 family protein; PFAM: Transposase, Tn3; SPTR: Transposase Tn3 family protein

DNA sequence :
ATGGGATTCCTTACTCTCGAACAGCGGCAACGCTACGGACGCTATGAGTCGGAACCAACACCTCGGCAATTGGCTCGGTA
CTTCCATCTTGACGATATGGATAAGGACAGCGTGAAAATTCGACGTGGGAATCATAACCGTCTGGGTTTTGCATTGCAGC
TCGTTAGCGTCAGGTTTTTAGGGACTTTTTTGGAAAATCCAATTGATGTTCCGCCTGGTGTTATCACTTATATAGCTACT
CAATTAAATATCGTAAATTACGATTTTTTGCCACGCTACCTTGAGCGCTCAGTTACCCATTGGGAGCATCAGGGCGAAAT
TAAGCAGCGCTATGGCTATCGAGATTTCAGCGCACAACCAGGAAACTGGCAACTGACTCGTTGGCTGTACGGACGTGCCT
GGGTTGGTTCGGAAGCTCCTAGTGTTCTATTTGACTTAGTTACAGCTAGGTTGGTTGAACATAAAATCCTTTTACCAGGA
GTTACAGTTTTGGAGCGTCTAGTTGCTAGCGTGCGGGAGCGGACTGCTAATCGTTTGTGGCGAATTTTAGCCAAAATTCC
TTCGGCGGAACAACGATTAAAGCTTGAAGCCTTACTGGTATCTGACAAAAAAACTTGGTACACACCACTCGACACATTGA
GGCGCTCTCCAACTCGTCACAGCGCTCCGGCTCTAGTCAATGCCTTAAATCGTCTGGTTGAGGTACGTTCCTTTGGTATC
AACACTTTGAATTTCTCAAAGCTACCAGCTAGCAGATTAAAAGCTCTTGCTCGCCACGCAGCAACAATTCGAGTAGCTGC
AATCGCCCGGATGCCATTTGAGCGGAGAATTGCTACTCTCGTTGCCTTCATTCAAGTGCTAGAAGCTACAGCCGCCGACG
ATACCCTCGATGTGTTGGAATTGTTGATCAAAGATTTACTCTCCAAGTCGGTGCGGGATGGGAAAAAGGAACGGTTACGC
ACGATAAAAGACCTGGATGCCGCAGCTTTGCGGTTGGGTGAAGCATGTTCCGTTATACTTGACCCCAATTGTGAAGATAA
AAGTGTGCGTGAAGTTGTTTTTCAACGCATCCCTCAAGAGAAATTACAATCTGCTGTGACAAAGGTGGAAGAACTAGCCA
GACCACCAGAAGATGACTATTACCCAGAACTGCTGAAGCGTTGGGCACATGTTCGCAGATTTCTCCCTTCACTATTACGG
ACAATCGATTTTCAAGCCACAAAAGCTGGTCAGTCAATTCTTAAAGCTGTGGAATTTCTCAAAAGTATTGAAAAAAAAGC
GAATCCCAAGATGGATGCTGCTCCACTTAATGGTATTACTAAAGGCTGGCTACAATTAATTGTACAACCGAATGCAGATA
TCGACCGTCGCGCTTACACTTTTTGTACCTTAGAGCGATTGTGTGAGGGATTGCGCCATCGGGAACTGTTTATCACTCCT
AGCATACGTTGGAGTAATCCCCATGCTAAATTACTACAAGGTTCATACTGGGAATCAGCCCGACCACAAGTTTGTCGAGC
GCTGAACCTACAACCAACACCCGAACCGGAACTGTCCAAGTTGAAGCAGCAACTTGAGGAAGCATTTCATCGTACTGCCA
ATAATCTGCCTAGCAATGCAGCGGTAAGGGTCGAACCTAACAAAAAAGGACGTGATACTTTAACAGTAACCAACCTGGAT
AAGTTGGAAGAACCTGCAAGTTTAAAAGCTCTCAAAACACTGGTAGCTTCCTTACTCCCCTGTGTGGACTTGCCTGAAGC
CTTGCTGGAAATCCATGCGAAAACAGGATTTATGGATGAATTTAACCACGGTAGCCAGGAAAGCTCACGAGTAACTGATT
TACCCATTAGTGTCTGTGCAGTGCTGATAGCGACTAGTTGTAACATAGGTCTGAAGCCAGTGATACGCGCAGACATTCCA
GCCCTAACTCGCAATCGACTGGCTTGGGTGCAGCAAAACTACCTTCGTTCTGAAACCTTGATTCGTGCTAATGCGCGGCT
GGTTGATGCTCAAACTCAGATTCCATTGGCACAGACTTGGGGTGGGGGAGAAGTCGCCTCGGCTGATGGATTACGTTTTG
TGGTGCCTGTGCAGACACTAAATTCTGGACCCAATAGCAAATATTTTGGTCGGGGTCGGGGTATTACTTACTACAACTTT
ACCTCAGACCAGTTTACTGGTTTTCACGGTTTGGTGGTTCCTGGAACACTGCGCGACTCTCTGGTTGTGTTGGTTGGGCT
TCTTGAGCAACAAACCAGTTTGAGTCCCAGAGAACTGATGACGGACACAAGCGGTTACAGCGATGTGATATTTGGACTAT
TCTGGCTACTAGGCTACCAGTTCAGTCCTCGGCTAGCAGATGTGGGAGAGGCTCGCTTTTGGCGTTTAGATTCGCTTGCA
GATTATGGGGTTCTAAATGGAATAGCACGCCAAAAAGTCAATACCTCTTTTATTGAGAATTATTGGGATGACATGCTACG
AGTTGCTGGGTCTTTGAAATTGGGAACGGTAAGCGCGTCAGAAATTATGCGAACTTTATACCGAGGTGACAAACCTTCTG
TTTTGGGTCGAGCGATTGGAGAGTTGGGACGTATAGCCAAAACTTTGTACCTATTAAACTATGTCGATGATGAGGCGTAC
CGTCGTCGAATTTTGACTCAGCTAAATCGAGGTGAAGGACGACATGGGCTTGCCAGAGTTATATTTCATGGTCAAAAGGG
TGAGTTGCGTCAACGTTACCGGGAGGGACAAGAAGACCAACTTTCGGCTTTGGGGTTAGTCGTAAATGCTTTGGTACTAT
GGAATACATATTATATGGATGCTGCACTTACCTCTATCGGTTTACAGCAAAGCATAAATCAAGAGGATATAGCGCGGCTA
TCGCCTTTGGGGCATTCCCACGTCAATATGTTAGGGCGTTATCAGTTTTCTTTACCTCTGGCAGTTATGCAGGGAGAAAT
GCGTCCATTACGCGATCCAAATGACCCAAATGAGCAGGAGGATTAA

Protein sequence :
MGFLTLEQRQRYGRYESEPTPRQLARYFHLDDMDKDSVKIRRGNHNRLGFALQLVSVRFLGTFLENPIDVPPGVITYIAT
QLNIVNYDFLPRYLERSVTHWEHQGEIKQRYGYRDFSAQPGNWQLTRWLYGRAWVGSEAPSVLFDLVTARLVEHKILLPG
VTVLERLVASVRERTANRLWRILAKIPSAEQRLKLEALLVSDKKTWYTPLDTLRRSPTRHSAPALVNALNRLVEVRSFGI
NTLNFSKLPASRLKALARHAATIRVAAIARMPFERRIATLVAFIQVLEATAADDTLDVLELLIKDLLSKSVRDGKKERLR
TIKDLDAAALRLGEACSVILDPNCEDKSVREVVFQRIPQEKLQSAVTKVEELARPPEDDYYPELLKRWAHVRRFLPSLLR
TIDFQATKAGQSILKAVEFLKSIEKKANPKMDAAPLNGITKGWLQLIVQPNADIDRRAYTFCTLERLCEGLRHRELFITP
SIRWSNPHAKLLQGSYWESARPQVCRALNLQPTPEPELSKLKQQLEEAFHRTANNLPSNAAVRVEPNKKGRDTLTVTNLD
KLEEPASLKALKTLVASLLPCVDLPEALLEIHAKTGFMDEFNHGSQESSRVTDLPISVCAVLIATSCNIGLKPVIRADIP
ALTRNRLAWVQQNYLRSETLIRANARLVDAQTQIPLAQTWGGGEVASADGLRFVVPVQTLNSGPNSKYFGRGRGITYYNF
TSDQFTGFHGLVVPGTLRDSLVVLVGLLEQQTSLSPRELMTDTSGYSDVIFGLFWLLGYQFSPRLADVGEARFWRLDSLA
DYGVLNGIARQKVNTSFIENYWDDMLRVAGSLKLGTVSASEIMRTLYRGDKPSVLGRAIGELGRIAKTLYLLNYVDDEAY
RRRILTQLNRGEGRHGLARVIFHGQKGELRQRYREGQEDQLSALGLVVNALVLWNTYYMDAALTSIGLQQSINQEDIARL
SPLGHSHVNMLGRYQFSLPLAVMQGEMRPLRDPNDPNEQED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA ACN81014.1 transposase Not tested AbaR5 Protein 0.0 53
tnpA AFV53105.1 transposase Not tested AbGRI2-1 Protein 0.0 53
unnamed ACF06166.1 transposase Not tested Tn5036-like Protein 0.0 53
ABTW07_3870 YP_005797118.1 transposase IS26 Not tested AbaR4e Protein 0.0 53
1_314 CAJ77075.1 Transposase Not tested AbaR1 Protein 0.0 53
IS15 CAJ77073.1 Insertion sequence Not tested AbaR1 Protein 0.0 52