|
Name : Cal6303_1518 (Cal6303_1518) Accession : YP_007136537.1 Strain : Calothrix sp. PCC 6303 Genome accession: NC_019751 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1785698 - 1787233 bp Length : 1536 bp Strand : - Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IP DNA sequence : ATGTCGGAAGAAGATATCCGTGCTACACGGCTAGAAAAAGCAGAACAATTAAAGCAGTTAGGGATGAACCCTTATGCTTA TCGCTGGGAAATAACCCATCACACCGAACAGTTGCAAGCGCAATTTGTCGATTTGCCCAGTAGTGAAGAGGTGAATATCG ATGTTGCGATCGCAGGACGCATCATGACACGTCGGTTTATGGGTAAACTGGCGTTTGCCACTCTCCAAGATGAAACTGGT AAAATCCAACTTTATCTTGATAAGCAAGCTGTTGATGATGGCATGGGTGAAATAATTCCCAATGCCTTTAAATCTCTAGA TAAACTCATGGATATCGGCGATATCCTGGGTGTAAAGGGAACCATTAAACGAACGCAAAAGGGTGAATTATCGGTCTATG TGAAGGAATTTGCGATTTTAACAAAGTCGTTGTTACCTTTACCAGATAAGTGGCATGGTTTAACAGATGTTGCTAAACGT TACCGTCAAAGATACATAGATTTAATTGTTAATCCTGAGGTACAACAGACTTTTCGTCGTCGTGCCAAAATTACTGCGGG TATTCGCAGATACTTGGAAGAACGTGATTTTCTAGAAATTGAAACCCCAGTATTGCAAGCAGAAGCAGGTGGTGCTGATG CGCGTCCCTTCGTGACTTACCACAATACCCTAGATATTCAGCTTTATTTGCGGATTGCCACGGAGTTACACCTGAAACGG TTAATTGTGGGTGGTTTTGAAAAGGTATTTGAGATGGGGAGAATTTTCCGTAATGAGGGAATTTCTACCCGTCATAATCC TGAATTTACTTCCATTGAGATTTATCAGGCTTATGCCGATTACGATGACATGATGAACCTCACGGAGGGAATTATCACCA CCGTTGCCCAGGATGTTTTGGGAACTTTAAAAATTAACTACCAAGGACAAGATATAGATTTGACACCACCTTGGCGACGG GTGACAATGCATGATTTGGTAAAAGATGCCACTGGCTTAGATTTCACAACTTTTTCCACTGTGGAAGAGGCAAAAACGGC ATGTAAAAATGCGGGAATTCCTGATGTTGATGAACACACTTCAATTGGTAAATTATTGGTTTTGGCTTTTGAAGAGAAGG TGGAAACAACTTTAATTCAACCAACATTTGTGATTGATTACCCAGTCGAAAATTCACCCTTAGCAAAACCCCACCGTTCT AAACCTGGTTTGGTGGAAAGGTTTGAGTTATTTATTGTGGGTAGGGAAACAGGGAATAGTTTTTCTGAGTTGACAGATCC GATCGATCAGAGACAAAGACTAGAAGCACAAGCTGCGAGGAAAGCTGAGGGGGACTTAGAAGCGCAGGGAGTTGATGAGG ACTTTATCACAGCTTTGGAGTACGGAATGCCTCCTACAGGGGGTTTAGGCATCGGTATCGATAGATTAGTGATGCTACTT ACAGATTGTGCCAGTATTAAAGACGCGATCGCATTCCCATTACTAAAGCCGGAAAAACCGGATTCTGATCAAATTTCATC TGAATCCCCAGAGTAA Protein sequence : MSEEDIRATRLEKAEQLKQLGMNPYAYRWEITHHTEQLQAQFVDLPSSEEVNIDVAIAGRIMTRRFMGKLAFATLQDETG KIQLYLDKQAVDDGMGEIIPNAFKSLDKLMDIGDILGVKGTIKRTQKGELSVYVKEFAILTKSLLPLPDKWHGLTDVAKR YRQRYIDLIVNPEVQQTFRRRAKITAGIRRYLEERDFLEIETPVLQAEAGGADARPFVTYHNTLDIQLYLRIATELHLKR LIVGGFEKVFEMGRIFRNEGISTRHNPEFTSIEIYQAYADYDDMMNLTEGIITTVAQDVLGTLKINYQGQDIDLTPPWRR VTMHDLVKDATGLDFTTFSTVEEAKTACKNAGIPDVDEHTSIGKLLVLAFEEKVETTLIQPTFVIDYPVENSPLAKPHRS KPGLVERFELFIVGRETGNSFSELTDPIDQRQRLEAQAARKAEGDLEAQGVDEDFITALEYGMPPTGGLGIGIDRLVMLL TDCASIKDAIAFPLLKPEKPDSDQISSESPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-109 | 49 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 3e-84 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cal6303_1518 | YP_007136537.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-110 | 49 |
