Gene Information

Name : Sta7437_0386 (Sta7437_0386)
Accession : YP_007130962.1
Strain : Stanieria cyanosphaera PCC 7437
Genome accession: NC_019748
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 437081 - 439549 bp
Length : 2469 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit

DNA sequence :
ATGTTTGAACGCTTCACAGAAAAAGCTATTAAAGTGATTATGTTAGCCCAGGAGGAAGCACGCCGTCTGGGACATAATTT
CGTAGGCACAGAGCAGATTCTTCTCGGTTTAATCGGTGAAGGAACTGGAGTCGCTGCCAAAGTTCTTAAATCTATGGGCG
TTAACCTGAAAGACGCTCGGATTGAAGTTGAAAAAATTATTGGTCGCGGTTCGGGTTTTGTGGCGGTGGAAATTCCTTTC
ACTCCCAGAGCCAAAAGAGTTCTTGAACTTTCTCTAGAAGAAGCTCGTCAATTAGGACACAATTACATCGGTACAGAACA
CCTTCTACTCGGTTTGATTCGGGAAGGGGAAGGTGTGGCTGCTAGGGTATTGGAAAATCTGGGTGTGGATTTATCGAAGG
TTCGCACTCAGGTGATTAGAATGCTTGGCGAAACTGCCGAGGTAGCAGCAGGTTCTGGTACTCAGGGAAGAAATAAAACT
CCGACCCTCGATGAATTTGGTTCTAATCTGACTCAAATGGCATCGGAAGGTAAACTCGATCCTGTAGTTGGTAGACAAAA
GGAAATCGAGCGAGTGATCCAGATTTTGGGTCGTCGAACCAAAAATAATCCTGTTTTAATCGGTGAACCTGGAGTAGGTA
AAACTGCGATCGCGGAAGGTTTAGCCCAACGGATTGCAAACAAAGATGTTCCAGATATTCTCGAAGACAAACGTGTGGTT
ACTCTCGATATTGGCTTGTTGGTAGCAGGTACTAAATATCGAGGTGAGTTTGAGGAACGACTCAAGAAGATTATGGATGA
AATTCGTCAGGCTGGAAATGTGATTCTGGTAATCGACGAGGTTCATACTTTAATTGGTGCTGGTGCAGCCGAAGGAGCAA
TCGACGCAGCTAATATCTTGAAACCAGCTTTGGCTAGAGGTGAGTTGCAGTGTATTGGTGCAACGACCCTTGATGAATAC
CGTAAGCATATCGAACGAGATGCAGCCCTGGAACGTCGTTTTCAACCTGTGATGGTAGGTGAACCAACCGTAGATGAAAC
AATTGAAATTCTGTACGGTTTGCGCGAACGTTACGAACAACACCATAAATTGAAAATTTTAGATGAGGCTTTAGAAGCAG
CAGCTAAACTATCTGACCGTTACATCAGCGATCGCTATTTACCTGATAAAGCGATTGATTTGATTGATGAGGCTGGTTCT
CGTGTTCGTTTGATTAATTCTCAACTTCCCCCGGCTGCTAAGGAACTGGATAAGGAATTGCGCGAAGTTCTCAAACAAAA
AGACGATGCAGTTCGAGCGCAAGATTTTGACCGGGCAGGGGAATTACGCGATCGCGAAATGGAAATCAAAGAAGAAATTC
GTTCGATCGCCTCGAATAAGAAAACTGAAGAAGATGGGGGGGATGATTCTCCTGTAGTTGATGCGGAAGAAATCGCTCAC
ATTGTCGCTTCTTGGACTGGTGTACCAGTTAACAAGATTACCGAATCGGAATCTGAAAAGCTGTTGCACATGGAAGATAC
TTTGCATCAGCGTATTATTGGTCAAGAAGATGCGGTGAAAGCTATTTCGAGAGCCATTCGTCGGGCTAGAGTTGGTCTAA
AAAATCCCAACCGTCCGATTGCGAGCTTTGTCTTCTCTGGTCCTACAGGCGTTGGTAAAACAGAGTTAACTAAAGCCTTA
GCTACCTATTTCTTTGGTTCGGAAGAAGCCATGATCCGACTGGATATGTCGGAGTATATGGAACGTCATACTGTTTCTAA
GCTGATTGGTTCTCCTCCTGGATATGTAGGTTACAACGAAGGCGGTCAGTTAACTGAAGCTGTTCGCCGTCGTCCTTATA
CAGTCGTGCTATTTGATGAGATTGAGAAAGCACACCCAGACATCTTCAATATGCTGTTACAAATTCTAGAAGATGGTCGC
CTGACTGATGCTAAGGGCAGAACGGTAGATTTCAAGAATACACTGATTATTCTGACTTCCAACATCGGTTCTAAAGTAAT
TGAGAAAGGTGGTGGTGGTTTAGGATTTGAGTTTGCCGATGACCAAGCCGAATCTCAATACAATCGTATTCGTTCTTTAG
TTAATGAGGAATTGAAGAACTACTTCCGTCCAGAATTCCTTAACCGCTTGGATGAAATCATTGTCTTCCGTCAATTGAGT
AAGGATGAAGTCAAAGAAATTTCCGAGCTTCTACTCAAGGAAGTATTTACTCGTCTAACAGAACAAGATATTACTTTGGA
AGTGACGGAGAAATTCAAGGAGCGTTTAGTAGAAGAAGGTTACAATCCTTCTTATGGTGCGCGTCCTCTTCGTCGAGCTA
TTATGCGCCTGTTGGAAGATGTACTTGCTGAAGAAATTCTTTCTGGTCGTTTAGGAGAAGGTGATACGGCACAAGTAGAT
ATTGACTCAGAAGGCAAGGTTAAAATTATTCCTCAAGCAAAAGAACAGGAATTATTACCTTCTTCTTAG

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVAAGSGTQGRNKT
PTLDEFGSNLTQMASEGKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKRVV
TLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY
RKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERYEQHHKLKILDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGS
RVRLINSQLPPAAKELDKELREVLKQKDDAVRAQDFDRAGELRDREMEIKEEIRSIASNKKTEEDGGDDSPVVDAEEIAH
IVASWTGVPVNKITESESEKLLHMEDTLHQRIIGQEDAVKAISRAIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKAL
ATYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDIFNMLLQILEDGR
LTDAKGRTVDFKNTLIILTSNIGSKVIEKGGGGLGFEFADDQAESQYNRIRSLVNEELKNYFRPEFLNRLDEIIVFRQLS
KDEVKEISELLLKEVFTRLTEQDITLEVTEKFKERLVEEGYNPSYGARPLRRAIMRLLEDVLAEEILSGRLGEGDTAQVD
IDSEGKVKIIPQAKEQELLPSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sta7437_0386 YP_007130962.1 ATPase AAA-2 domain protein VFG0079 Protein 0.0 60
Sta7437_0386 YP_007130962.1 ATPase AAA-2 domain protein VFG0080 Protein 2e-155 54