Gene Information

Name : Sta7437_0356 (Sta7437_0356)
Accession : YP_007130933.1
Strain : Stanieria cyanosphaera PCC 7437
Genome accession: NC_019748
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 395451 - 398108 bp
Length : 2658 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activi

DNA sequence :
ATGCAGCCTACCGATTCTAGTAAATTTACCGAACAAGCTTGGGATGCGATCGTCAAATCACAAGAATTTGCCAAATTATT
TCAAAATCAAAATTTAGAAGTAGAACACGTAATTTTAGCGCTAGTGGAACAAGAAGGATTAGCTCAAACTATTTTTAGTA
AAGCTAATATTGATGTTGCTCGCCTCAAACAACAGCTAGAAGTATTTACCCATCGCCAACCTAAAACTGGTGCCACTCAA
CTGTATCTCGGTCGTGCTTTAGATGAAATGTTAGATCGTGCCGAGTCTTGTCGTGCGAGTTGGCAAGATAAGTTTATTTC
TATCGAACACTTGTTGATGGGTTTTGCCGAAGATAATCGGATTGGTAAGCGTACGCTACGAAATTTCAGTTTAGACCCCC
AAGACTTAGAAAAAGTGATTAAATCGATTCGGGGTAGTCAAAAAGTAACTCAACAAAATCAAGAAGAAAGATATCAGGCG
TTAGAAAAATATGGTAGAGATTTAACTCAACAAGCTAAAAATGGCAAGCTAGACCCCGTTATCGGTAGAGATGAAGAGAT
TCGTCGAGTAATACAGGTGCTTTCGCGTCGTTCTAAGAATAATCCTGTTTTAATTGGTGAACCTGGAGTCGGAAAAACTG
CGATCGCGGAAGGATTGGCACAACGAATTGTCAATGGAGATGTACCCGAATCGCTCAAAAACCGTCAGTTAATTTCTCTA
GATATGGGTAGTTTAATTGCTGGGGCGAAATATCGTGGGGAATTTGAAGACAGATTGCGTTCGGTACTAAAAGAGGTAAC
TCAATCAGAAGGACAGATTGTTTTATTTATTGATGAAGTTCATACCGTAGTTGGTGCAGGTTCTCGTGAAGGTTCGATGG
ATGCAGGAAATCTGCTCAAACCAATGCTAGCTAGAGGCGAACTACGTTGTATTGGGGCGACTACTTTAGATGAGTATCGT
AAACATATTGAAAAAGATCCTGCTTTAGAAAGGCGCTTTCAACAGGTTTATGTCAAACAACCAACGGTAGAAGATACTGT
TTCTATTTTACGGGGATTAAAAGAACGTTATGAAGTTCATCATGGAGTTAAAATTACCGACTCTGCTTTAGTTGCAGCAG
CTACTCTTTCCCATCGTTATATTACAGATAGATTTTTGCCTGATAAAGCGATCGATCTAGTAGACGAAGCAGCAGCAAAA
TTAAAGATGGAAATCACTTCTAAACCTGTAGAATTAGAAGCGATCGACCGTCGGTTGATGCAGCTACAGATGGAAAAACT
TTCCTTAGAAGGAGAAAGTCAACGTCCTGGTATTCTAGTAGTTGATCGTGCTTCCAAAGAAAGATTAGAAAGGATTCAAG
AAGAAATTAAGGAACTCGAAAGTAAACAAACCGAACTTTCTTCTCAATGGCAATCAGAAAAACAACTTTTGGATGAAATT
AACGCTCTTAAAGAAGAAGAAGAACAACTACGTTTACAAGTAGAACAGGCAGAAAGGGCTTACGATCTCAATAAGGCTGC
TCAATTGAAATACGGAAAACTGGAAATCTTGCAGCGAGATTTAGAAGCTAAAGAAACTCAACTGCTAGAAATTCAATCCG
AAGGTGCAGCTTTACTGAGAGAACAAGTAAGCGAATCTGATATTGCGGAAATTGTCGCGAATTGGACAGGAATACCTGTT
AATCGGCTGTTAGAGTCAGAAAAGCAAAAACTTTTACAACTAGAACAACATCTGGCAAAAAGAGTCATTGGACAAAAAGA
AGCTGTCGAAGCTGTAGCAGCAGCAATTCGTCGTGCTAGGGCTGGAATGAAAGACCCCAGTAGACCGATTGGTTCATTTT
TGTTTATGGGTTCAACAGGGGTAGGTAAAACTGAATTAGCTAGGGCGTTAGCTGCTTTCCTCTTTGATAGCGAAGATGCC
ATGGTGCGGATTGATATGTCCGAGTACATGGAAAAACACGCCGTTTCTCGTTTGGTAGGTGCGCCTCCTGGATATGTCGG
TTATGAAGAAGGAGGACAATTATCAGAAGCGGTACGCCGTCGTCCTTATTCGGTAGTTTTATTAGATGAAGTAGAAAAGG
CACACAAAGATGTTTTTAATATTTTGCTGCAAGTTCTTGATGATGGCAGAATTACTGACTCTCAAGGCAGAATAGTTGAT
TTCCGCAATACTATTATTGTCATGACTAGCAATATTGGTAGTGAATCTATTCTTAGTGGGATGGAAGAAAAAACTGACTA
CTATACGATTGAAAAACAAGTAACTCAGGCTTTAAGAAAACATTTTCGTCCAGAATTTCTCAACCGAATTGATGATTTAA
TCTTTTTCCATACGCTTGGGCGAGAACAATTACGTCAGATCGTTCGGATTCAAATTAAACGCATTCAAAATTTATTAGCT
GAACAAAAAATTAGACTGGAATTATCAACTTCGGCTCAAGATTATATTGTCGATATTGGTTACGATCCTGCTTATGGTGC
GCGTCCTTTAAAACGAGCAATTCAGCGAGAATTAGAAAATCCGATCGCAACTAAAATTTTAGACAATACCTTTACAGAAG
GAGATACCATCTTTGTCGATTGTAGCGATCATCATCTTACTTTTGCCGACTCGGAAAAACTTTTACCAATAGTCCCAGAA
GTACTTAATTCTAATTAA

Protein sequence :
MQPTDSSKFTEQAWDAIVKSQEFAKLFQNQNLEVEHVILALVEQEGLAQTIFSKANIDVARLKQQLEVFTHRQPKTGATQ
LYLGRALDEMLDRAESCRASWQDKFISIEHLLMGFAEDNRIGKRTLRNFSLDPQDLEKVIKSIRGSQKVTQQNQEERYQA
LEKYGRDLTQQAKNGKLDPVIGRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIVNGDVPESLKNRQLISL
DMGSLIAGAKYRGEFEDRLRSVLKEVTQSEGQIVLFIDEVHTVVGAGSREGSMDAGNLLKPMLARGELRCIGATTLDEYR
KHIEKDPALERRFQQVYVKQPTVEDTVSILRGLKERYEVHHGVKITDSALVAAATLSHRYITDRFLPDKAIDLVDEAAAK
LKMEITSKPVELEAIDRRLMQLQMEKLSLEGESQRPGILVVDRASKERLERIQEEIKELESKQTELSSQWQSEKQLLDEI
NALKEEEEQLRLQVEQAERAYDLNKAAQLKYGKLEILQRDLEAKETQLLEIQSEGAALLREQVSESDIAEIVANWTGIPV
NRLLESEKQKLLQLEQHLAKRVIGQKEAVEAVAAAIRRARAGMKDPSRPIGSFLFMGSTGVGKTELARALAAFLFDSEDA
MVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHKDVFNILLQVLDDGRITDSQGRIVD
FRNTIIVMTSNIGSESILSGMEEKTDYYTIEKQVTQALRKHFRPEFLNRIDDLIFFHTLGREQLRQIVRIQIKRIQNLLA
EQKIRLELSTSAQDYIVDIGYDPAYGARPLKRAIQRELENPIATKILDNTFTEGDTIFVDCSDHHLTFADSEKLLPIVPE
VLNSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-98 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sta7437_0356 YP_007130933.1 ATP-dependent chaperone ClpB VFG2084 Protein 5e-105 43